Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14100

Experiment: L-Isoleucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRR42_RS14090 and RR42_RS14095 are separated by 199 nucleotidesRR42_RS14095 and RR42_RS14100 are separated by 170 nucleotidesRR42_RS14100 and RR42_RS14105 are separated by 15 nucleotides RR42_RS14090: RR42_RS14090 - 3-oxoacyl-ACP synthase, at 3,031,611 to 3,032,843 _RS14090 RR42_RS14095: RR42_RS14095 - acyl carrier protein, at 3,033,043 to 3,033,282 _RS14095 RR42_RS14100: RR42_RS14100 - 3-ketoacyl-ACP reductase, at 3,033,453 to 3,034,202 _RS14100 RR42_RS14105: RR42_RS14105 - ACP S-malonyltransferase, at 3,034,218 to 3,035,153 _RS14105 Position (kb) 3033 3034 3035Strain fitness (log2 ratio) -1 0 1 2at 3033.360 kb on - strandat 3033.372 kb on - strandat 3034.220 kb on - strandat 3035.168 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Isoleucine (N)
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3,033,360 - +2.2
3,033,372 - +0.7
3,034,220 - -0.2
3,035,168 - -0.3

Or see this region's nucleotide sequence