Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_876

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
1,000,580	-				-0.3
1,000,624	-				-0.0
1,000,624	-				-0.1
1,000,624	-				-2.6
1,000,692	+				+1.7
1,000,692	+				+0.5
1,000,692	+				-0.7
1,000,693	-				-0.1
1,000,724	-				-1.3
1,000,733	+				+0.1
1,000,733	+				+0.2
1,000,733	+				-1.7
1,000,734	-				+2.2
1,000,734	-				-0.9
1,000,734	-				-0.1
1,000,760	+				+1.9
1,000,783	+				-0.1
1,000,783	+				+0.5
1,000,783	+				+0.7
1,000,783	+				+0.3
1,000,783	+				-0.4
1,000,783	+				-0.7
1,000,783	+				-0.9
1,000,784	-				-2.4
1,000,784	-				-0.3
1,000,784	-				-1.2
1,000,784	-				-0.5
1,000,784	-				+1.6
1,000,784	-				+1.3
1,000,784	-				-0.3
1,000,784	-				+0.6
1,000,784	-				-1.4
1,000,785	+				-0.0
1,000,786	-				-0.7
1,000,786	-				+0.4
1,000,905	+		Pf1N1B4_875	0.20	-1.9
1,000,906	-		Pf1N1B4_875	0.20	-1.9
1,000,906	-		Pf1N1B4_875	0.20	-1.8
1,001,027	-		Pf1N1B4_875	0.35	-2.3
1,001,372	+		Pf1N1B4_875	0.78	-1.4
1,001,372	+				+0.9
1,001,373	-		Pf1N1B4_875	0.78	-0.7
1,001,373	-				-1.4
1,001,530	-				+0.6
1,001,612	-				-0.1
1,001,762	-		Pf1N1B4_876	0.16	-0.4
1,001,863	-		Pf1N1B4_876	0.24	-0.4
1,001,932	+		Pf1N1B4_876	0.30	+0.5
1,002,216	-		Pf1N1B4_876	0.53	-0.9
1,002,298	+		Pf1N1B4_876	0.59	+0.0
1,002,299	-				+0.3
1,002,299	-		Pf1N1B4_876	0.59	-1.0
1,002,299	-		Pf1N1B4_876	0.59	-0.4
1,002,354	+		Pf1N1B4_876	0.64	-0.1
1,002,355	-		Pf1N1B4_876	0.64	-2.7
1,002,431	-		Pf1N1B4_876	0.70	-1.0
1,002,809	+				+0.0
1,002,810	-				+0.1
1,002,810	-				-1.3
1,002,814	-				-0.6
1,002,814	-				+0.1
1,002,814	-				-0.9
1,002,829	-				+0.1
1,002,829	-				-1.1
1,002,848	+				+1.9
1,002,849	-				+1.9
1,002,849	-				-0.3
1,002,849	-				+0.9
1,002,849	-				+0.7
1,002,849	-				+0.9
1,002,849	-				+0.2
1,002,892	-				+0.5
1,002,892	-				-0.0
1,002,957	+				+0.1
1,002,975	+				+0.6
1,002,976	-				+1.3
1,003,007	+				-0.0
1,003,007	+				+0.1
1,003,010	+				+0.6
1,003,010	+				-0.6
1,003,010	+				+1.2
1,003,010	+				+0.9
1,003,010	+				-0.9
1,003,010	+				-0.1
1,003,010	+				-1.1
1,003,010	+				+0.2
1,003,011	-				-0.2
1,003,011	-				+0.9
1,003,011	-				-0.1
1,003,011	-				+0.7
1,003,011	-				-0.7
1,003,011	-				-0.4
1,003,154	+		Pf1N1B4_877	0.13	+0.0
1,003,154	+		Pf1N1B4_877	0.13	+1.5
1,003,154	+		Pf1N1B4_877	0.13	+0.3
1,003,163	+		Pf1N1B4_877	0.14	+2.0
1,003,163	+		Pf1N1B4_877	0.14	+0.2
1,003,163	+				-0.1
1,003,164	-		Pf1N1B4_877	0.14	-0.1
1,003,164	-		Pf1N1B4_877	0.14	+0.8
1,003,164	-		Pf1N1B4_877	0.14	+0.1
1,003,169	+		Pf1N1B4_877	0.14	+0.1
1,003,169	+		Pf1N1B4_877	0.14	+1.7
1,003,169	+		Pf1N1B4_877	0.14	+0.9
1,003,170	-		Pf1N1B4_877	0.15	+0.9
1,003,170	-		Pf1N1B4_877	0.15	+0.9
1,003,397	+		Pf1N1B4_877	0.42	-0.9
1,003,398	-		Pf1N1B4_877	0.43	+0.6
1,003,688	+		Pf1N1B4_877	0.78	+0.3
1,003,688	+		Pf1N1B4_877	0.78	+0.1
1,003,688	+		Pf1N1B4_877	0.78	+0.4
1,003,688	+		Pf1N1B4_877	0.78	+1.6
1,003,688	+		Pf1N1B4_877	0.78	+1.6
1,003,688	+		Pf1N1B4_877	0.78	+1.7
1,003,688	+		Pf1N1B4_877	0.78	+0.6
1,003,688	+				-1.1
1,003,688	+				+1.9
1,003,688	+		Pf1N1B4_877	0.78	-0.9
1,003,689	-		Pf1N1B4_877	0.78	+0.3
1,003,689	-		Pf1N1B4_877	0.78	+0.1
1,003,689	-		Pf1N1B4_877	0.78	-0.1
1,003,689	-		Pf1N1B4_877	0.78	-0.4
1,003,689	-		Pf1N1B4_877	0.78	-1.3