Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_866
Experiment: Spectinomycin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.025 mg/ml |
---|---|---|---|---|---|
remove | |||||
993,346 | - | +0.6 | |||
993,346 | - | -0.7 | |||
993,346 | - | +0.9 | |||
993,487 | - | Pf1N1B4_866 | 0.22 | -0.5 | |
993,487 | - | Pf1N1B4_866 | 0.22 | +0.6 | |
993,487 | - | Pf1N1B4_866 | 0.22 | -1.1 | |
993,487 | - | Pf1N1B4_866 | 0.22 | -1.8 | |
993,884 | - | +1.2 | |||
993,884 | - | +1.5 | |||
993,884 | - | +1.1 | |||
993,884 | - | +0.0 | |||
993,990 | - | +0.7 | |||
994,007 | + | -1.4 | |||
994,007 | + | +0.7 | |||
994,007 | + | +1.2 | |||
994,142 | + | +0.3 | |||
994,171 | + | +0.9 | |||
994,172 | - | +0.5 | |||
994,220 | + | Pf1N1B4_867 | 0.10 | -2.4 | |
994,221 | - | Pf1N1B4_867 | 0.10 | +0.3 | |
994,221 | - | Pf1N1B4_867 | 0.10 | -0.4 | |
994,221 | - | Pf1N1B4_867 | 0.10 | +0.6 | |
994,221 | - | Pf1N1B4_867 | 0.10 | -0.1 | |
994,273 | + | Pf1N1B4_867 | 0.17 | +0.9 |
Or see this region's nucleotide sequence