Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_72

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
75,206	-		Pf1N1B4_71	0.69	+1.0
75,210	-		Pf1N1B4_71	0.69	+1.6
75,320	+		Pf1N1B4_71	0.77	-0.8
75,523	-				+1.6
75,523	-				+1.2
75,523	-				+0.6
75,523	-				+0.3
75,745	+				+0.5
75,745	+				+1.2
75,745	+				-1.0
75,745	+				-0.1
75,745	+				-1.0
75,746	-				+0.0
75,746	-				-1.0
75,746	-				+0.6
75,746	-				-2.5
75,749	-				-1.7
75,749	-				+0.7
75,829	+				+0.3
76,251	+		Pf1N1B4_72	0.58	-0.6
76,251	+		Pf1N1B4_72	0.58	-1.3
76,252	-		Pf1N1B4_72	0.58	-0.4
76,252	-		Pf1N1B4_72	0.58	+1.6
76,656	+				+1.6
76,657	-				-0.9
76,688	+				+1.3
76,689	-				+0.2
76,689	-				+0.4
76,689	-				+0.6
76,689	-				-1.2
76,786	-				+1.0
76,813	+				-0.2
76,814	-				+0.4
76,973	-		Pf1N1B4_73	0.18	+0.1
76,973	-		Pf1N1B4_73	0.18	+0.6
77,071	+		Pf1N1B4_73	0.26	+0.2
77,124	-		Pf1N1B4_73	0.31	+1.5
77,132	+		Pf1N1B4_73	0.32	+2.1
77,133	-		Pf1N1B4_73	0.32	+0.1
77,133	-		Pf1N1B4_73	0.32	+0.8
77,133	-		Pf1N1B4_73	0.32	-1.0
77,133	-		Pf1N1B4_73	0.32	+2.2
77,179	+		Pf1N1B4_73	0.36	-0.2
77,179	+		Pf1N1B4_73	0.36	-0.1
77,179	+		Pf1N1B4_73	0.36	+0.8
77,180	-		Pf1N1B4_73	0.36	-0.4
77,180	-		Pf1N1B4_73	0.36	-1.7
77,245	+		Pf1N1B4_73	0.41	-0.0
77,246	-		Pf1N1B4_73	0.41	+0.9
77,293	+		Pf1N1B4_73	0.45	-0.2
77,407	+		Pf1N1B4_73	0.55	-1.1
77,408	-		Pf1N1B4_73	0.55	+0.6
77,408	-		Pf1N1B4_73	0.55	-1.7
77,408	-		Pf1N1B4_73	0.55	+0.2
77,440	+		Pf1N1B4_73	0.58	+2.6
77,452	+		Pf1N1B4_73	0.59	-0.4