Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5294

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
49,183	-				-0.3
49,231	+				+0.2
49,231	+				+0.3
49,231	+				+0.1
49,231	+				-0.5
49,231	+				-0.5
49,231	+				-0.1
49,231	+				+0.9
49,231	+				+1.1
49,231	+				+1.3
49,231	+				+0.3
49,231	+				+0.0
49,231	+				+1.2
49,232	-				+0.1
49,232	-				+0.5
49,232	-				-0.0
49,232	-				-2.1
49,232	-				+0.2
49,232	-				-1.7
49,235	+				+2.9
49,235	+				+0.1
49,235	+				-0.2
49,235	+				+0.4
49,235	+				-0.3
49,235	+				+0.7
49,235	+				+0.5
49,235	+				+1.3
49,235	+				+1.7
49,236	-				-0.2
49,236	-				+0.0
49,236	-				-0.1
49,236	-				-0.3
49,236	-				+0.4
49,261	+				-0.3
49,262	-				+0.7
49,285	+				+1.3
49,312	+				-0.3
49,312	+				-1.2
49,358	+				+1.0
49,359	-				-0.9
49,359	-				+0.0
49,359	-				-1.3
49,379	+				+0.7
49,379	+				+0.3
49,379	+				-0.3
49,379	+				-0.3
49,380	-				+0.4
49,380	-				+0.2
49,431	+				-1.3
49,431	+				-0.9
49,432	-				-0.5
49,432	-				-1.1
49,448	+				+0.1
49,459	+				-0.1
49,569	+				-0.5
49,570	-				-0.9
49,659	+				+0.7
49,659	+				-1.3
49,996	+		Pf1N1B4_5293	0.48	+1.1
49,996	+		Pf1N1B4_5293	0.48	-1.1
49,996	+		Pf1N1B4_5293	0.48	+0.2
49,996	+		Pf1N1B4_5293	0.48	+1.2
49,996	+		Pf1N1B4_5293	0.48	-1.6
49,997	-		Pf1N1B4_5293	0.49	-0.2
50,009	-		Pf1N1B4_5293	0.54	-0.4
50,010	+		Pf1N1B4_5293	0.55	+0.3
50,011	-		Pf1N1B4_5293	0.55	-0.3
50,011	-		Pf1N1B4_5293	0.55	-1.4
50,152	+				+0.0
50,152	+				+1.9
50,153	-				+1.7
50,266	-		Pf1N1B4_5294	0.83	-1.0
50,266	-		Pf1N1B4_5294	0.83	-0.1
50,329	+				+0.4
50,330	-				-0.9
50,374	+				+0.0
50,374	+				+0.1
50,383	+				+1.2
50,530	+		Pf1N1B4_5295	0.47	+0.5
50,530	+		Pf1N1B4_5295	0.47	-0.9
50,530	+		Pf1N1B4_5295	0.47	+0.9
50,530	+		Pf1N1B4_5295	0.47	+0.7
50,530	+		Pf1N1B4_5295	0.47	+1.3
50,530	+		Pf1N1B4_5295	0.47	+0.0
50,530	+		Pf1N1B4_5295	0.47	-2.9
50,530	+		Pf1N1B4_5295	0.47	-0.9
50,530	+				-0.9
50,530	+		Pf1N1B4_5295	0.47	-1.3
50,531	-		Pf1N1B4_5295	0.48	+1.5
50,531	-				-0.1
50,531	-		Pf1N1B4_5295	0.48	+1.4
50,531	-		Pf1N1B4_5295	0.48	-0.1
50,557	-		Pf1N1B4_5295	0.57	-0.2
50,557	-		Pf1N1B4_5295	0.57	+0.1
50,582	+		Pf1N1B4_5295	0.66	+0.9
50,596	-		Pf1N1B4_5295	0.71	-1.1
50,658	+				-0.7
50,658	+				+0.1
50,699	-				+0.3
50,791	+				-0.4
50,974	+		Pf1N1B4_5296	0.40	+0.0
50,974	+		Pf1N1B4_5296	0.40	+1.4
50,974	+		Pf1N1B4_5296	0.40	-0.5
50,974	+				+0.7
50,974	+		Pf1N1B4_5296	0.40	+1.0
50,974	+				-1.9
50,974	+		Pf1N1B4_5296	0.40	+1.1
50,974	+		Pf1N1B4_5296	0.40	+0.1
50,974	+		Pf1N1B4_5296	0.40	+0.8
50,975	-		Pf1N1B4_5296	0.40	-1.6
50,975	-		Pf1N1B4_5296	0.40	-0.3
50,975	-		Pf1N1B4_5296	0.40	-0.5
51,001	+		Pf1N1B4_5296	0.51	+0.1
51,001	+		Pf1N1B4_5296	0.51	+0.7
51,002	-		Pf1N1B4_5296	0.51	-0.1
51,034	-		Pf1N1B4_5296	0.64	-0.6
51,166	-				-2.1
51,166	-				+0.1