Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5145

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
5,725,803	+				-0.1
5,725,804	-				-0.7
5,725,811	+				+1.0
5,725,820	-				-0.0
5,725,823	+				-0.2
5,725,824	-				-0.3
5,725,824	-				-1.2
5,725,824	-				+0.7
5,725,824	-				-2.6
5,725,824	-				-2.1
5,725,883	+				+0.7
5,726,202	-				+0.3
5,726,768	-				-0.3
5,726,854	+				-0.8
5,726,982	+		Pf1N1B4_5145	0.14	+0.3
5,726,982	+				-2.6
5,726,982	+		Pf1N1B4_5145	0.14	+0.3
5,726,983	-				+0.3
5,727,010	-		Pf1N1B4_5145	0.16	-0.0
5,727,059	+		Pf1N1B4_5145	0.19	+0.3
5,727,089	+		Pf1N1B4_5145	0.21	-1.1
5,727,090	-		Pf1N1B4_5145	0.21	-0.8
5,727,101	+		Pf1N1B4_5145	0.22	-2.2
5,727,279	+		Pf1N1B4_5145	0.33	+0.6
5,727,280	-		Pf1N1B4_5145	0.33	-2.7
5,727,280	-		Pf1N1B4_5145	0.33	-2.3
5,727,420	-		Pf1N1B4_5145	0.42	-0.2
5,727,431	-		Pf1N1B4_5145	0.43	+0.3
5,727,442	+		Pf1N1B4_5145	0.44	-1.2
5,727,487	-				-1.7
5,727,547	+		Pf1N1B4_5145	0.51	-2.0
5,727,548	-		Pf1N1B4_5145	0.51	-0.9
5,727,548	-		Pf1N1B4_5145	0.51	-1.2
5,727,666	+		Pf1N1B4_5145	0.59	-0.7
5,727,667	-		Pf1N1B4_5145	0.59	-2.1
5,727,667	-				+0.3
5,727,667	-		Pf1N1B4_5145	0.59	+0.3
5,727,969	-		Pf1N1B4_5145	0.78	-1.7
5,727,969	-		Pf1N1B4_5145	0.78	-1.0
5,727,969	-		Pf1N1B4_5145	0.78	+0.7
5,727,969	-		Pf1N1B4_5145	0.78	-0.3
5,728,157	+				+0.1
5,728,157	+				+0.6
5,728,158	-				-2.7
5,728,393	-				+0.2
5,728,423	+				+0.6
5,728,489	-				+0.3
5,728,510	-				+1.3
5,728,860	+		Pf1N1B4_5146	0.43	+0.3
5,729,000	-		Pf1N1B4_5146	0.59	+0.5
5,729,000	-		Pf1N1B4_5146	0.59	+0.5
5,729,000	-				+1.3
5,729,119	+		Pf1N1B4_5146	0.73	-0.6
5,729,267	-				+0.8
5,729,268	+				+0.1
5,729,269	-				-1.4
5,729,269	-				-0.6
5,729,269	-				-0.2
5,729,269	-				+0.1
5,729,269	-				-0.5