Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4777

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
5,278,127	-				-0.6
5,278,307	+		Pf1N1B4_4776	0.31	-1.7
5,278,307	+		Pf1N1B4_4776	0.31	-0.1
5,278,308	-		Pf1N1B4_4776	0.31	-1.1
5,278,308	-		Pf1N1B4_4776	0.31	-0.9
5,278,308	-		Pf1N1B4_4776	0.31	-0.1
5,278,308	-		Pf1N1B4_4776	0.31	+1.7
5,278,388	+		Pf1N1B4_4776	0.44	-1.5
5,278,477	-		Pf1N1B4_4776	0.58	-1.2
5,278,539	-				+0.8
5,278,705	+				-0.4
5,278,705	+				+0.3
5,278,706	-				+1.7
5,278,706	-				+1.5
5,278,783	-				-0.4
5,278,783	-				-1.0
5,278,788	+				+0.3
5,278,788	+				-0.5
5,278,789	-				+0.3
5,278,899	+				+0.7
5,279,031	+				-0.0
5,279,032	-				-0.7
5,279,032	-				+2.7
5,279,045	+				+0.4
5,279,046	-				+0.1
5,279,046	-				+0.3
5,279,046	-				-2.3
5,279,082	-				+0.3
5,279,530	-		Pf1N1B4_4777	0.56	-2.3
5,279,530	-		Pf1N1B4_4777	0.56	-0.5
5,279,588	+		Pf1N1B4_4777	0.63	-0.1
5,279,649	-		Pf1N1B4_4777	0.71	-0.4
5,279,750	+		Pf1N1B4_4777	0.83	-1.9
5,279,787	-		Pf1N1B4_4777	0.88	-0.1
5,279,851	+				-1.1
5,279,851	+				+0.3
5,279,852	-				-1.3
5,280,167	+		Pf1N1B4_4778	0.33	-1.2
5,280,168	-		Pf1N1B4_4778	0.33	+0.7
5,280,168	-				-0.7
5,280,275	+		Pf1N1B4_4778	0.46	+0.5
5,280,275	+		Pf1N1B4_4778	0.46	-0.6
5,280,276	-				+1.3
5,280,294	+		Pf1N1B4_4778	0.48	+1.1
5,280,294	+		Pf1N1B4_4778	0.48	-2.1
5,280,295	-		Pf1N1B4_4778	0.49	-2.1
5,280,295	-		Pf1N1B4_4778	0.49	-0.2
5,280,393	-		Pf1N1B4_4778	0.60	+1.1
5,280,398	-		Pf1N1B4_4778	0.61	+0.8
5,280,398	-		Pf1N1B4_4778	0.61	+0.3
5,280,494	+		Pf1N1B4_4778	0.73	+0.3
5,280,494	+				+0.8
5,280,494	+				+2.0
5,280,494	+		Pf1N1B4_4778	0.73	-1.0
5,280,494	+		Pf1N1B4_4778	0.73	+0.6
5,280,674	+				+0.3
5,280,674	+				+1.3
5,280,674	+				-0.5
5,280,675	-				+0.4
5,280,872	+		Pf1N1B4_4779	0.23	+0.8