Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4404

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,863,780	-				+0.2
4,863,855	-				+0.4
4,863,858	+				-1.2
4,863,859	-				+0.2
4,863,859	-				-1.2
4,863,969	+				-0.8
4,863,970	-				-0.6
4,863,988	+				+0.8
4,863,988	+				-0.8
4,863,991	-				+1.8
4,864,125	-				+0.5
4,864,168	+				-1.1
4,864,168	+				+0.0
4,864,169	-				-0.1
4,864,170	+				-1.2
4,864,171	-				+0.3
4,864,172	+				+1.2
4,864,309	+				-1.2
4,864,491	+				-0.9
4,864,601	+				-0.2
4,864,601	+				+0.4
4,864,624	+				-0.6
4,864,625	-				+1.1
4,864,625	-				-0.6
4,864,639	+				+0.6
4,864,639	+				+0.8
4,864,643	+				+0.3
4,864,644	-				-1.0
4,865,056	+		Pf1N1B4_4404	0.38	+0.4
4,865,249	+		Pf1N1B4_4404	0.58	-0.6
4,865,249	+		Pf1N1B4_4404	0.58	+0.1
4,865,249	+		Pf1N1B4_4404	0.58	-0.5
4,865,442	+		Pf1N1B4_4404	0.78	-0.7
4,865,464	+		Pf1N1B4_4404	0.80	-1.2
4,865,465	-				+0.9
4,865,667	+				-1.0
4,865,754	+				-0.5
4,865,754	+				-0.2
4,865,775	+				+2.7
4,865,775	+				+0.4
4,865,775	+				-1.4
4,865,775	+				-0.4
4,865,775	+				-1.2
4,865,775	+				-0.1
4,865,854	+				+1.4
4,865,855	-				+0.4
4,865,855	-				-0.3
4,865,855	-				+0.7
4,865,858	+				-2.2
4,865,858	+				-0.6
4,865,858	+				-0.0
4,865,859	-				-2.4
4,865,859	-				-0.8
4,865,859	-				-0.2
4,865,859	-				-0.2
4,865,859	-				-0.6
4,865,859	-				-0.6
4,865,893	+				+0.6
4,865,893	+				+1.7
4,865,894	-				+0.4
4,865,896	+				+1.5
4,865,916	-				-0.4
4,866,102	+		Pf1N1B4_4405	0.14	-0.6
4,866,103	-		Pf1N1B4_4405	0.14	-0.6
4,866,103	-				-0.6
4,866,103	-		Pf1N1B4_4405	0.14	+1.1
4,866,245	+		Pf1N1B4_4405	0.24	-0.6
4,866,245	+		Pf1N1B4_4405	0.24	-0.2
4,866,296	+		Pf1N1B4_4405	0.27	-1.0
4,866,369	+		Pf1N1B4_4405	0.32	-0.1
4,866,369	+		Pf1N1B4_4405	0.32	+1.0
4,866,370	-				+0.9
4,866,371	+		Pf1N1B4_4405	0.32	-1.0