Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_430

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
499,627	+		Pf1N1B4_429	0.74	-1.3
499,628	-		Pf1N1B4_429	0.75	+0.7
499,655	+		Pf1N1B4_429	0.84	+0.7
499,655	+		Pf1N1B4_429	0.84	+0.4
499,655	+		Pf1N1B4_429	0.84	-0.3
499,656	-		Pf1N1B4_429	0.84	+1.7
499,737	-				-0.9
499,750	+				+0.3
499,750	+				-1.3
499,763	-				-0.3
499,788	+				-0.6
499,789	-				+0.5
499,789	-				+1.1
499,863	+				+0.2
499,903	+				-1.3
499,903	+				-0.0
499,904	-				-0.1
499,904	-				+0.5
499,962	+				-1.3
499,962	+				+1.1
499,962	+				-1.6
499,962	+				+0.7
499,963	-				-0.1
499,972	+				-1.3
500,094	+				-0.3
500,094	+				-0.1
500,094	+				-1.9
500,095	-				+1.4
500,095	-				+1.4
500,104	-				-0.9
500,111	+				+0.5
500,129	-				+1.7
500,235	-				+0.5
500,338	+				+0.7
500,386	+		Pf1N1B4_430	0.14	-1.5
500,387	-		Pf1N1B4_430	0.15	-1.3
500,387	-		Pf1N1B4_430	0.15	+0.2
500,416	-		Pf1N1B4_430	0.39	+0.7
500,416	-		Pf1N1B4_430	0.39	-2.1
500,515	+				+1.2
500,560	+				+0.3
500,613	+				+0.1
500,615	+				+0.5
500,615	+				+1.3
500,615	+				-0.7
500,615	+				+0.7
500,615	+				-0.3
500,615	+				+1.7
500,615	+				-1.4
500,616	-				+0.7
500,616	-				+0.2
500,616	-				+2.3
500,831	+				-2.0
500,850	-				+0.4
500,903	-				-0.6
500,909	-				-0.6
500,909	-				+0.7
500,909	-				-0.3
500,909	-				+1.5
500,913	-				-1.6
500,913	-				+0.0
500,990	-				-0.7
501,035	-				+0.2
501,035	-				-0.7
501,035	-				-1.0
501,043	+				-0.9
501,043	+				-0.5
501,043	+				+1.7
501,044	-				+1.3
501,044	-				-0.6
501,047	+				-0.1
501,047	+				-0.5
501,047	+				+1.0
501,047	+				+0.5
501,047	+				-0.6
501,047	+				-1.3
501,047	+				-0.3
501,048	-				+0.7
501,048	-				+0.7
501,059	+				+0.5
501,060	-				+3.0
501,094	+				-0.1
501,151	+				+1.0
501,152	-				+0.5
501,190	-				+0.1
501,190	-				-0.6
501,197	-				+0.7
501,197	-				+0.0
501,246	+				-0.2
501,251	+				-0.4
501,251	+				+0.9
501,251	+				+0.7
501,251	+				-0.4
501,251	+				-1.3
501,251	+				+0.7
501,251	+				-1.1
501,252	-				+0.5
501,252	-				+0.7
501,252	-				+1.2
501,252	-				+2.9
501,252	-				-0.9
501,252	-				-0.6
501,252	-				-0.9
501,463	-				+0.7
501,463	-				-0.3
501,463	-				+1.5