Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4246

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,705,786	+		Pf1N1B4_4245	0.62	+0.4
4,705,787	-		Pf1N1B4_4245	0.62	-0.5
4,705,798	+		Pf1N1B4_4245	0.63	-0.2
4,705,798	+		Pf1N1B4_4245	0.63	-0.8
4,705,826	-		Pf1N1B4_4245	0.65	-1.2
4,705,826	-		Pf1N1B4_4245	0.65	-0.8
4,705,849	+		Pf1N1B4_4245	0.66	+1.2
4,705,849	+		Pf1N1B4_4245	0.66	-1.0
4,705,849	+		Pf1N1B4_4245	0.66	-0.7
4,705,849	+		Pf1N1B4_4245	0.66	-0.0
4,705,850	-		Pf1N1B4_4245	0.67	-1.2
4,705,850	-		Pf1N1B4_4245	0.67	+1.4
4,705,867	+		Pf1N1B4_4245	0.68	+0.6
4,705,867	+				-0.6
4,705,868	-		Pf1N1B4_4245	0.68	-1.6
4,706,141	-		Pf1N1B4_4245	0.88	-0.5
4,706,141	-		Pf1N1B4_4245	0.88	+0.4
4,706,349	+				+1.4
4,706,349	+				+0.0
4,706,350	-				+1.0
4,706,350	-				-0.0
4,706,431	+				-1.0
4,706,431	+				+2.0
4,706,431	+				+1.3
4,706,432	-				-0.9
4,706,432	-				+0.2
4,706,577	+				+0.1
4,706,577	+				-0.3
4,706,577	+				+0.2
4,706,577	+				-1.2
4,706,577	+				-1.2
4,706,577	+				+0.4
4,706,578	-				+1.1
4,707,015	+		Pf1N1B4_4246	0.27	-2.2
4,707,016	-		Pf1N1B4_4246	0.27	-1.5
4,707,117	+		Pf1N1B4_4246	0.33	+0.6
4,707,117	+		Pf1N1B4_4246	0.33	-0.8
4,707,118	-		Pf1N1B4_4246	0.33	-1.6
4,707,118	-		Pf1N1B4_4246	0.33	-1.4
4,707,121	+		Pf1N1B4_4246	0.33	+0.7
4,707,122	-		Pf1N1B4_4246	0.33	+0.9
4,707,567	+		Pf1N1B4_4246	0.59	-2.6
4,707,568	-		Pf1N1B4_4246	0.59	-1.2
4,707,805	+		Pf1N1B4_4246	0.72	+1.4
4,708,250	+				+0.7
4,708,250	+				-0.8
4,708,311	+				+0.0
4,708,355	+				-1.6
4,708,355	+				-0.5
4,708,357	+				-0.3
4,708,358	-				-2.2
4,708,577	+				-0.4
4,708,578	-				+0.6
4,708,629	+				+1.6
4,708,630	-				-2.4
4,708,674	+				+0.9
4,708,674	+				+1.6
4,708,744	+				-1.2
4,708,775	+				+1.4
4,708,775	+				+0.4
4,708,775	+				+1.2
4,708,787	-				+1.6
4,708,812	+				+0.1
4,708,812	+				+0.4
4,708,813	-				+0.3
4,708,818	+				+1.6
4,708,823	+				+0.9