Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4011

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,461,556	+				-0.3
4,461,597	+				-1.0
4,461,597	+				-0.0
4,461,597	+				+1.0
4,461,598	-				-2.4
4,461,598	-				+0.6
4,461,598	-				+0.2
4,461,598	-				+0.1
4,461,598	-				-0.3
4,461,630	+				-1.2
4,461,761	+		Pf1N1B4_4010	0.11	+1.0
4,461,818	+		Pf1N1B4_4010	0.18	+0.2
4,461,819	-		Pf1N1B4_4010	0.18	+2.2
4,461,940	+		Pf1N1B4_4010	0.32	-1.2
4,462,085	+		Pf1N1B4_4010	0.49	-0.4
4,462,085	+		Pf1N1B4_4010	0.49	-0.4
4,462,085	+		Pf1N1B4_4010	0.49	+0.2
4,462,085	+		Pf1N1B4_4010	0.49	+0.6
4,462,085	+		Pf1N1B4_4010	0.49	+0.6
4,462,086	-		Pf1N1B4_4010	0.49	+0.6
4,462,086	-		Pf1N1B4_4010	0.49	-0.2
4,462,086	-				-0.0
4,462,091	+		Pf1N1B4_4010	0.49	-0.2
4,462,091	+		Pf1N1B4_4010	0.49	-0.4
4,462,091	+		Pf1N1B4_4010	0.49	+1.3
4,462,091	+		Pf1N1B4_4010	0.49	-0.0
4,462,091	+		Pf1N1B4_4010	0.49	-0.3
4,462,091	+		Pf1N1B4_4010	0.49	-0.5
4,462,091	+		Pf1N1B4_4010	0.49	+1.1
4,462,092	-		Pf1N1B4_4010	0.50	-1.2
4,462,205	+		Pf1N1B4_4010	0.63	+0.4
4,462,206	-		Pf1N1B4_4010	0.63	-1.2
4,462,206	-		Pf1N1B4_4010	0.63	+0.9
4,462,209	-		Pf1N1B4_4010	0.63	+0.0
4,462,457	+				+1.6
4,462,457	+				+0.9
4,462,458	-				-1.0
4,462,494	-				+0.6
4,462,566	-				+0.1
4,462,571	-				+0.6
4,462,571	-				-1.0
4,462,598	-				+0.3
4,462,685	-		Pf1N1B4_4011	0.18	-1.0
4,462,714	+		Pf1N1B4_4011	0.22	-0.6
4,462,738	+		Pf1N1B4_4011	0.25	-1.7
4,462,741	+		Pf1N1B4_4011	0.25	-0.4
4,462,742	-		Pf1N1B4_4011	0.26	-0.3
4,462,742	-		Pf1N1B4_4011	0.26	-1.0
4,462,792	+		Pf1N1B4_4011	0.32	+1.6
4,462,900	+		Pf1N1B4_4011	0.45	-1.0
4,462,900	+		Pf1N1B4_4011	0.45	-0.8
4,462,900	+		Pf1N1B4_4011	0.45	-0.7
4,462,900	+		Pf1N1B4_4011	0.45	-0.7
4,462,900	+		Pf1N1B4_4011	0.45	-0.4
4,463,033	-		Pf1N1B4_4011	0.62	-0.2
4,463,523	-		Pf1N1B4_4012	0.64	+0.8
4,463,668	+				+0.3
4,463,668	+				-0.0
4,463,668	+				+0.6
4,463,668	+				+0.6
4,463,669	-				-1.7
4,463,698	+				+0.9
4,463,698	+				-1.7
4,463,698	+				+2.9
4,463,699	-				+1.2
4,463,762	+				+0.3
4,463,763	-				+0.8
4,464,047	+		Pf1N1B4_4013	0.22	+0.8
4,464,047	+		Pf1N1B4_4013	0.22	+0.9
4,464,048	-		Pf1N1B4_4013	0.22	-0.7
4,464,048	-				+0.2
4,464,048	-		Pf1N1B4_4013	0.22	-1.0
4,464,147	-		Pf1N1B4_4013	0.27	+1.4
4,464,218	+		Pf1N1B4_4013	0.31	-1.6
4,464,219	-		Pf1N1B4_4013	0.32	-0.6
4,464,251	+		Pf1N1B4_4013	0.33	+1.3
4,464,312	-		Pf1N1B4_4013	0.37	+0.2
4,464,330	+		Pf1N1B4_4013	0.38	-1.0