Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3744

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,154,710	+				-0.0
4,154,710	+				-1.5
4,154,710	+				+0.1
4,154,929	-				-0.4
4,155,052	-		Pf1N1B4_3743	0.19	-0.7
4,155,126	+		Pf1N1B4_3743	0.30	-1.2
4,155,146	-		Pf1N1B4_3743	0.33	-0.7
4,155,411	+				-0.9
4,155,411	+		Pf1N1B4_3743	0.74	-0.9
4,155,411	+		Pf1N1B4_3743	0.74	-0.5
4,155,412	-		Pf1N1B4_3743	0.74	-0.8
4,155,412	-		Pf1N1B4_3743	0.74	-0.6
4,155,412	-		Pf1N1B4_3743	0.74	+0.2
4,155,412	-		Pf1N1B4_3743	0.74	-1.7
4,155,412	-		Pf1N1B4_3743	0.74	-0.9
4,155,412	-				-0.9
4,155,412	-		Pf1N1B4_3743	0.74	+0.3
4,155,412	-		Pf1N1B4_3743	0.74	+0.3
4,155,412	-		Pf1N1B4_3743	0.74	-2.5
4,155,441	+				+1.6
4,155,441	+		Pf1N1B4_3743	0.79	-0.6
4,155,442	-		Pf1N1B4_3743	0.79	+0.9
4,155,442	-		Pf1N1B4_3743	0.79	+0.1
4,155,655	-				-0.2
4,155,655	-				+0.6
4,155,677	+				-0.9
4,155,678	-				-0.4
4,155,678	-				-0.4
4,155,678	-				-0.9
4,155,678	-				+0.3
4,155,678	-				+0.8
4,155,678	-				-0.7
4,155,678	-				-0.4
4,155,973	+		Pf1N1B4_3744	0.28	-1.7
4,155,973	+		Pf1N1B4_3744	0.28	+0.8
4,155,973	+		Pf1N1B4_3744	0.28	-0.2
4,155,973	+		Pf1N1B4_3744	0.28	-0.7
4,155,973	+		Pf1N1B4_3744	0.28	-0.4
4,155,974	-		Pf1N1B4_3744	0.28	-0.9
4,156,018	+		Pf1N1B4_3744	0.33	-1.6
4,156,018	+		Pf1N1B4_3744	0.33	-0.5
4,156,018	+		Pf1N1B4_3744	0.33	-0.7
4,156,019	-		Pf1N1B4_3744	0.33	-1.5
4,156,019	-		Pf1N1B4_3744	0.33	-1.4
4,156,044	+		Pf1N1B4_3744	0.35	+0.2
4,156,044	+		Pf1N1B4_3744	0.35	+0.1
4,156,044	+				+0.6
4,156,045	-				-0.9
4,156,433	-		Pf1N1B4_3744	0.75	+0.9
4,156,630	-				-0.4
4,156,630	-				+0.6
4,156,634	+				+1.0
4,156,634	+				-0.2
4,156,635	-				+0.8
4,156,635	-				-0.0
4,156,675	+				+0.9
4,156,676	-				+0.1
4,156,676	-				-0.1
4,156,676	-				+0.3
4,156,706	-				-1.7
4,156,706	-				+1.2
4,156,743	+				+0.6
4,156,783	+		Pf1N1B4_3745	0.13	+0.3
4,156,792	+		Pf1N1B4_3745	0.14	-0.4
4,156,792	+		Pf1N1B4_3745	0.14	-0.9
4,156,801	-		Pf1N1B4_3745	0.15	-0.4
4,157,049	+		Pf1N1B4_3745	0.46	-1.7
4,157,049	+		Pf1N1B4_3745	0.46	-1.9
4,157,050	-		Pf1N1B4_3745	0.46	-1.7
4,157,050	-				-0.9
4,157,320	-		Pf1N1B4_3745	0.80	-2.5
4,157,332	+		Pf1N1B4_3745	0.82	-0.4
4,157,379	+		Pf1N1B4_3745	0.87	+0.1
4,157,380	-		Pf1N1B4_3745	0.88	+0.6
4,157,427	+				+3.2
4,157,427	+				-0.4
4,157,427	+				+0.6
4,157,427	+				+0.6
4,157,427	+				+0.3
4,157,428	-				+0.1
4,157,446	-				+0.2
4,157,449	+				-1.5
4,157,482	+				+1.2
4,157,482	+				+0.6
4,157,482	+				-0.4
4,157,483	-				+0.1
4,157,647	+		Pf1N1B4_3746	0.21	+0.9