Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3729

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
4,138,351	+		Pf1N1B4_3728	0.57	+0.3
4,138,351	+		Pf1N1B4_3728	0.57	-0.9
4,138,351	+		Pf1N1B4_3728	0.57	-1.1
4,138,352	-		Pf1N1B4_3728	0.57	+0.4
4,138,371	+		Pf1N1B4_3728	0.58	+0.9
4,138,371	+				-1.7
4,138,372	-				+1.6
4,138,496	+		Pf1N1B4_3728	0.65	-0.4
4,138,496	+		Pf1N1B4_3728	0.65	-0.4
4,138,497	-		Pf1N1B4_3728	0.65	+0.4
4,138,537	+		Pf1N1B4_3728	0.67	-1.2
4,138,537	+		Pf1N1B4_3728	0.67	+0.6
4,138,537	+		Pf1N1B4_3728	0.67	+0.6
4,138,537	+		Pf1N1B4_3728	0.67	-1.9
4,138,537	+		Pf1N1B4_3728	0.67	-0.9
4,138,537	+		Pf1N1B4_3728	0.67	+0.2
4,138,537	+		Pf1N1B4_3728	0.67	-0.4
4,138,538	-		Pf1N1B4_3728	0.67	-0.7
4,138,709	+		Pf1N1B4_3728	0.76	+0.6
4,138,709	+		Pf1N1B4_3728	0.76	+0.5
4,138,735	+		Pf1N1B4_3728	0.77	+0.3
4,138,735	+		Pf1N1B4_3728	0.77	-0.1
4,138,739	-		Pf1N1B4_3728	0.78	+0.5
4,138,747	+		Pf1N1B4_3728	0.78	-1.7
4,138,828	+		Pf1N1B4_3728	0.82	+0.8
4,139,129	+				+0.1
4,139,155	+				-0.9
4,139,225	+				-0.9
4,139,225	+				+0.5
4,139,226	-				-0.4
4,139,285	-				+0.3
4,139,423	-				+1.2
4,139,423	-		Pf1N1B4_3729	0.44	+0.4
4,139,533	+		Pf1N1B4_3729	0.79	-0.4
4,139,533	+		Pf1N1B4_3729	0.79	-0.6
4,139,533	+		Pf1N1B4_3729	0.79	-1.1
4,139,534	-		Pf1N1B4_3729	0.80	-1.4
4,139,534	-		Pf1N1B4_3729	0.80	-0.9
4,139,534	-				-0.4
4,139,678	+				+0.6
4,139,679	-				+0.1
4,139,679	-				-0.2
4,139,679	-				-0.6
4,139,679	-				-1.5
4,139,679	-				+0.1
4,139,711	+				-0.9
4,139,711	+				+2.0
4,139,712	-				+1.1
4,139,719	+				+0.6
4,139,719	+				+0.6
4,139,768	+				-0.4
4,139,779	+				+0.3
4,139,779	+				-1.4
4,139,779	+				+0.5
4,139,780	-				+0.3
4,139,962	+		Pf1N1B4_3730	0.25	-0.9
4,139,962	+		Pf1N1B4_3730	0.25	-1.2
4,139,962	+		Pf1N1B4_3730	0.25	+0.3
4,139,974	+		Pf1N1B4_3730	0.27	-0.0
4,139,975	-		Pf1N1B4_3730	0.27	-0.8
4,140,462	+		Pf1N1B4_3730	0.77	+0.2
4,140,463	-		Pf1N1B4_3730	0.77	-0.4
4,140,562	-				+0.6