Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3487

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
3,893,399	-		Pf1N1B4_3486	0.38	+0.1
3,893,501	+		Pf1N1B4_3486	0.48	-0.2
3,893,718	-		Pf1N1B4_3486	0.70	-0.5
3,893,828	+		Pf1N1B4_3486	0.81	+0.4
3,893,828	+		Pf1N1B4_3486	0.81	+1.4
3,893,829	-		Pf1N1B4_3486	0.81	-1.7
3,893,829	-		Pf1N1B4_3486	0.81	-0.9
3,893,829	-		Pf1N1B4_3486	0.81	-0.9
3,894,024	+				+1.3
3,894,025	-				+0.7
3,894,177	+				+0.3
3,894,338	+				+0.3
3,894,338	+				+1.0
3,894,362	-				-0.5
3,894,362	-				+0.4
3,894,362	-				-0.5
3,894,386	+				+0.2
3,894,387	-				-0.9
3,894,388	+				-0.6
3,894,389	-				-0.4
3,894,399	-				+0.4
3,894,536	-		Pf1N1B4_3487	0.13	+1.4
3,894,608	+				-0.9
3,894,609	-		Pf1N1B4_3487	0.18	+0.1
3,894,609	-		Pf1N1B4_3487	0.18	-2.6
3,895,001	+		Pf1N1B4_3487	0.48	-0.5
3,895,049	+		Pf1N1B4_3487	0.51	+1.4
3,895,049	+		Pf1N1B4_3487	0.51	+1.1
3,895,049	+		Pf1N1B4_3487	0.51	-1.6
3,895,049	+		Pf1N1B4_3487	0.51	+0.2
3,895,049	+		Pf1N1B4_3487	0.51	+0.4
3,895,049	+		Pf1N1B4_3487	0.51	+0.2
3,895,049	+		Pf1N1B4_3487	0.51	+1.5
3,895,049	+		Pf1N1B4_3487	0.51	+1.0
3,895,049	+		Pf1N1B4_3487	0.51	-1.3
3,895,049	+		Pf1N1B4_3487	0.51	+0.3
3,895,049	+		Pf1N1B4_3487	0.51	+1.7
3,895,049	+		Pf1N1B4_3487	0.51	+0.4
3,895,049	+		Pf1N1B4_3487	0.51	+1.5
3,895,049	+		Pf1N1B4_3487	0.51	+1.7
3,895,049	+		Pf1N1B4_3487	0.51	+0.7
3,895,049	+		Pf1N1B4_3487	0.51	-0.3
3,895,050	-				-1.3
3,895,050	-		Pf1N1B4_3487	0.51	+1.7
3,895,050	-		Pf1N1B4_3487	0.51	-0.1
3,895,050	-		Pf1N1B4_3487	0.51	+1.4
3,895,133	+				+0.1
3,895,283	-		Pf1N1B4_3487	0.69	-0.0
3,895,283	-		Pf1N1B4_3487	0.69	-0.6
3,895,292	+		Pf1N1B4_3487	0.69	-2.5
3,895,292	+		Pf1N1B4_3487	0.69	+1.3
3,895,293	-		Pf1N1B4_3487	0.70	-1.6
3,895,293	-		Pf1N1B4_3487	0.70	-1.9
3,895,333	+		Pf1N1B4_3487	0.73	-0.6
3,895,334	-		Pf1N1B4_3487	0.73	-0.3
3,895,334	-		Pf1N1B4_3487	0.73	+0.1
3,895,650	+				-0.9
3,895,651	-				+0.7
3,895,697	+				+0.0
3,895,697	+				-0.3
3,895,697	+				-1.6
3,895,697	+				-0.9
3,895,697	+				-1.9
3,895,697	+				+0.9
3,895,697	+				-0.9
3,895,697	+				+0.0
3,895,697	+				+0.2
3,895,697	+				-0.5
3,895,697	+				-2.3
3,895,698	-				+0.7
3,895,698	-				+0.7
3,895,698	-				-0.6
3,895,698	-				+0.4
3,895,698	-				-0.3
3,895,698	-				+0.7
3,895,701	+				+1.7
3,895,702	-				+1.0
3,895,702	-				-0.9
3,895,814	+				+2.9
3,895,844	+				-0.3
3,895,844	+				+1.9
3,895,844	+				-0.0
3,895,845	-				-0.9
3,895,845	-				+1.2
3,895,845	-				+0.6
3,895,845	-				-0.9
3,895,845	-				-0.3
3,895,845	-				-0.9
3,895,845	-				+0.7
3,895,845	-				+1.0
3,895,845	-				-1.3
3,895,845	-				-0.4
3,895,845	-				+0.7
3,895,845	-				+1.7
3,895,845	-				+0.9
3,895,845	-				+0.5
3,895,845	-				-0.3
3,896,025	+				+0.7
3,896,025	+		Pf1N1B4_3488	0.15	+0.7
3,896,025	+		Pf1N1B4_3488	0.15	-1.1
3,896,202	+		Pf1N1B4_3488	0.30	+0.3
3,896,202	+		Pf1N1B4_3488	0.30	-1.9
3,896,202	+		Pf1N1B4_3488	0.30	+0.1
3,896,202	+		Pf1N1B4_3488	0.30	+0.7
3,896,202	+		Pf1N1B4_3488	0.30	-0.9
3,896,202	+				-0.3
3,896,202	+		Pf1N1B4_3488	0.30	+0.4
3,896,202	+		Pf1N1B4_3488	0.30	-1.1
3,896,202	+		Pf1N1B4_3488	0.30	+1.4
3,896,203	-		Pf1N1B4_3488	0.30	-0.9
3,896,203	-		Pf1N1B4_3488	0.30	+1.7
3,896,203	-		Pf1N1B4_3488	0.30	-0.3
3,896,238	+		Pf1N1B4_3488	0.33	-1.3
3,896,238	+		Pf1N1B4_3488	0.33	-0.9
3,896,239	-		Pf1N1B4_3488	0.33	-0.5
3,896,239	-		Pf1N1B4_3488	0.33	-1.5
3,896,268	+		Pf1N1B4_3488	0.36	+0.4
3,896,269	-		Pf1N1B4_3488	0.36	-0.9
3,896,269	-		Pf1N1B4_3488	0.36	+1.4
3,896,295	+		Pf1N1B4_3488	0.38	+0.1
3,896,296	-		Pf1N1B4_3488	0.38	-0.0
3,896,548	-		Pf1N1B4_3488	0.59	-1.6
3,896,548	-		Pf1N1B4_3488	0.59	+0.7
3,896,548	-		Pf1N1B4_3488	0.59	-2.0
3,896,553	+		Pf1N1B4_3488	0.60	+1.2
3,896,553	+		Pf1N1B4_3488	0.60	-0.5
3,896,553	+				-0.9
3,896,554	-		Pf1N1B4_3488	0.60	-0.5
3,896,556	+		Pf1N1B4_3488	0.60	+0.4
3,896,556	+		Pf1N1B4_3488	0.60	+0.7