Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2432

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,756,411	+		Pf1N1B4_2431	0.19	+0.6
2,756,411	+		Pf1N1B4_2431	0.19	+0.0
2,756,412	-		Pf1N1B4_2431	0.19	+0.8
2,756,534	+		Pf1N1B4_2431	0.32	-0.9
2,756,534	+		Pf1N1B4_2431	0.32	-1.9
2,756,535	-		Pf1N1B4_2431	0.32	+1.1
2,756,535	-		Pf1N1B4_2431	0.32	-0.9
2,756,535	-		Pf1N1B4_2431	0.32	+0.5
2,756,535	-		Pf1N1B4_2431	0.32	+0.3
2,756,535	-		Pf1N1B4_2431	0.32	+1.4
2,756,739	-		Pf1N1B4_2431	0.53	-1.5
2,756,810	+		Pf1N1B4_2431	0.61	+0.4
2,756,810	+		Pf1N1B4_2431	0.61	+0.5
2,756,811	-		Pf1N1B4_2431	0.61	+0.5
2,757,006	-		Pf1N1B4_2431	0.81	+0.6
2,757,006	-		Pf1N1B4_2431	0.81	-0.1
2,757,245	+				-1.1
2,757,389	+				-1.0
2,757,420	+				+1.2
2,757,420	+				-1.2
2,757,421	-				+1.4
2,757,510	+		Pf1N1B4_2432	0.11	-1.7
2,757,619	+		Pf1N1B4_2432	0.23	-0.4
2,757,811	-		Pf1N1B4_2432	0.43	+0.6
2,758,088	+		Pf1N1B4_2432	0.72	-1.5
2,758,132	+		Pf1N1B4_2432	0.77	-0.9
2,758,132	+		Pf1N1B4_2432	0.77	-0.9
2,758,180	-		Pf1N1B4_2432	0.82	-0.6
2,758,279	-				+0.8
2,758,348	-				+0.5
2,758,488	+				-0.1
2,758,489	-				-2.8
2,758,521	+				+1.1
2,758,522	-				+1.4
2,758,522	-				-0.2
2,758,522	-				-0.3
2,758,537	-		Pf1N1B4_2433	0.12	+0.5
2,758,537	-		Pf1N1B4_2433	0.12	+0.1
2,758,660	+		Pf1N1B4_2433	0.41	+0.4
2,758,660	+		Pf1N1B4_2433	0.41	+0.1
2,758,661	-		Pf1N1B4_2433	0.42	+1.5
2,758,661	-		Pf1N1B4_2433	0.42	+1.1
2,758,661	-		Pf1N1B4_2433	0.42	+0.9
2,758,661	-		Pf1N1B4_2433	0.42	-0.4
2,758,937	+				-0.0
2,758,937	+				+0.4
2,758,937	+				-1.1
2,758,938	-				+1.5
2,758,938	-				+0.5
2,758,945	+				+0.3
2,758,945	+				-0.1
2,758,945	+				-0.2
2,759,076	+		Pf1N1B4_2434	0.52	+0.2
2,759,077	-		Pf1N1B4_2434	0.53	-0.2
2,759,180	+				+0.7
2,759,180	+				+0.5
2,759,180	+				-2.5
2,759,181	-				+0.7
2,759,181	-				+0.4
2,759,181	-				-0.1
2,759,181	-				-0.2
2,759,181	-				-1.9
2,759,247	+				+0.7
2,759,248	-				-0.9
2,759,248	-				-0.3
2,759,248	-				-0.0
2,759,248	-				-0.1
2,759,281	+		Pf1N1B4_2435	0.25	-0.5
2,759,317	+		Pf1N1B4_2435	0.48	-0.0
2,759,317	+		Pf1N1B4_2435	0.48	-0.0
2,759,329	+		Pf1N1B4_2435	0.56	-0.6