Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2142

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,452,480	+				+1.2
2,452,480	+		Pf1N1B4_2141	0.39	-0.1
2,452,480	+		Pf1N1B4_2141	0.39	-0.5
2,452,480	+		Pf1N1B4_2141	0.39	+1.9
2,452,480	+		Pf1N1B4_2141	0.39	+0.4
2,452,480	+		Pf1N1B4_2141	0.39	+0.7
2,452,480	+		Pf1N1B4_2141	0.39	-2.3
2,452,481	-		Pf1N1B4_2141	0.39	-0.3
2,452,481	-		Pf1N1B4_2141	0.39	-2.1
2,452,481	-		Pf1N1B4_2141	0.39	-0.6
2,452,535	-		Pf1N1B4_2141	0.44	+0.5
2,452,535	-		Pf1N1B4_2141	0.44	-0.3
2,452,535	-		Pf1N1B4_2141	0.44	-1.1
2,452,535	-		Pf1N1B4_2141	0.44	-0.5
2,452,739	-		Pf1N1B4_2141	0.59	+0.4
2,453,221	+				-1.6
2,453,221	+				-0.3
2,453,222	-				-0.7
2,453,224	+				-0.6
2,453,224	+				-1.3
2,453,224	+				+0.1
2,453,224	+				+2.8
2,453,225	-				-0.2
2,453,225	-				+0.7
2,453,225	-				-0.6
2,453,225	-				+0.7
2,453,225	-				-0.3
2,453,225	-				-0.1
2,453,225	-				-0.4
2,453,225	-				+1.4
2,453,225	-				+0.1
2,453,225	-				+0.6
2,453,225	-				-0.8
2,453,276	+				+1.6
2,453,320	+				+0.5
2,453,320	+				-1.2
2,453,320	+				-1.2
2,453,321	-				+0.7
2,453,321	-				+0.3
2,453,321	-				+0.9
2,453,400	-				+0.0
2,453,400	-				-0.7
2,453,456	-				+1.1
2,453,628	+		Pf1N1B4_2142	0.58	+0.5
2,453,628	+		Pf1N1B4_2142	0.58	+1.8
2,453,628	+		Pf1N1B4_2142	0.58	+0.7
2,453,628	+		Pf1N1B4_2142	0.58	+0.3
2,453,628	+		Pf1N1B4_2142	0.58	+0.1
2,453,628	+		Pf1N1B4_2142	0.58	-1.3
2,453,628	+		Pf1N1B4_2142	0.58	-1.7
2,453,628	+		Pf1N1B4_2142	0.58	+0.8
2,453,628	+		Pf1N1B4_2142	0.58	+1.3
2,453,628	+		Pf1N1B4_2142	0.58	+1.4
2,453,629	-		Pf1N1B4_2142	0.58	+0.3
2,453,629	-		Pf1N1B4_2142	0.58	+0.2
2,453,629	-		Pf1N1B4_2142	0.58	+0.8
2,453,629	-		Pf1N1B4_2142	0.58	-1.2
2,453,629	-		Pf1N1B4_2142	0.58	-0.8
2,453,629	-		Pf1N1B4_2142	0.58	-1.7
2,453,629	-		Pf1N1B4_2142	0.58	+0.7
2,453,745	+				+0.4
2,453,745	+				+0.5
2,453,745	+				-2.2
2,453,745	+				+1.3
2,453,745	+				-2.2
2,453,745	+				+0.8
2,453,745	+				-0.3
2,453,745	+				-0.0
2,453,745	+				-0.7
2,453,745	+				-0.4
2,453,745	+				+0.5
2,453,745	+				-1.1
2,453,745	+				+0.7
2,453,745	+				-1.3
2,453,745	+				-0.1
2,453,745	+				-1.7
2,453,745	+				+0.2
2,453,745	+				-1.1
2,453,745	+				+0.3
2,453,745	+				-1.7
2,453,746	-				+1.5
2,453,746	-				+1.0
2,453,746	-				+0.4
2,453,746	-				+1.3
2,453,746	-				+2.3
2,453,746	-				-0.1
2,453,746	-				+1.3
2,453,746	-				-0.3
2,453,746	-				-0.7
2,453,746	-				+1.3
2,453,746	-				+0.3
2,453,746	-				-0.6
2,453,746	-				-0.2
2,453,746	-				+2.8
2,453,944	+		Pf1N1B4_2143	0.10	+1.1
2,453,944	+		Pf1N1B4_2143	0.10	+1.1
2,453,944	+		Pf1N1B4_2143	0.10	+2.3
2,453,944	+		Pf1N1B4_2143	0.10	-0.3
2,453,944	+		Pf1N1B4_2143	0.10	-0.3
2,453,944	+		Pf1N1B4_2143	0.10	-0.5
2,453,945	-		Pf1N1B4_2143	0.10	+0.4
2,453,945	-		Pf1N1B4_2143	0.10	-0.1
2,453,945	-		Pf1N1B4_2143	0.10	+0.1
2,453,945	-		Pf1N1B4_2143	0.10	+0.8
2,453,945	-		Pf1N1B4_2143	0.10	-0.5
2,453,945	-		Pf1N1B4_2143	0.10	-0.7
2,453,946	+		Pf1N1B4_2143	0.11	-0.1
2,453,946	+		Pf1N1B4_2143	0.11	-0.6
2,453,946	+		Pf1N1B4_2143	0.11	-0.1
2,453,946	+		Pf1N1B4_2143	0.11	+0.5
2,453,946	+		Pf1N1B4_2143	0.11	+0.9
2,453,946	+		Pf1N1B4_2143	0.11	+0.4
2,453,946	+		Pf1N1B4_2143	0.11	+1.3
2,453,947	-		Pf1N1B4_2143	0.11	+0.9
2,453,947	-		Pf1N1B4_2143	0.11	-0.3
2,453,947	-		Pf1N1B4_2143	0.11	+0.1
2,453,947	-		Pf1N1B4_2143	0.11	-0.5
2,453,947	-		Pf1N1B4_2143	0.11	+0.7
2,453,947	-		Pf1N1B4_2143	0.11	-0.2
2,453,947	-		Pf1N1B4_2143	0.11	-0.9
2,453,947	-		Pf1N1B4_2143	0.11	+0.7
2,453,947	-		Pf1N1B4_2143	0.11	+0.2
2,453,947	-		Pf1N1B4_2143	0.11	-0.6
2,453,947	-		Pf1N1B4_2143	0.11	-0.1
2,453,947	-		Pf1N1B4_2143	0.11	-0.2
2,453,947	-		Pf1N1B4_2143	0.11	+0.0
2,453,947	-		Pf1N1B4_2143	0.11	-2.4
2,453,947	-		Pf1N1B4_2143	0.11	-0.1
2,453,947	-		Pf1N1B4_2143	0.11	-1.7
2,454,077	+		Pf1N1B4_2143	0.37	-0.3
2,454,077	+		Pf1N1B4_2143	0.37	-0.3
2,454,077	+		Pf1N1B4_2143	0.37	-0.7
2,454,077	+		Pf1N1B4_2143	0.37	+0.1
2,454,078	-		Pf1N1B4_2143	0.38	+0.7
2,454,078	-		Pf1N1B4_2143	0.38	-1.6
2,454,078	-		Pf1N1B4_2143	0.38	-0.2
2,454,122	-		Pf1N1B4_2143	0.47	-0.9
2,454,122	-		Pf1N1B4_2143	0.47	+0.1
2,454,122	-		Pf1N1B4_2143	0.47	+0.6
2,454,136	-		Pf1N1B4_2143	0.49	+1.8
2,454,169	+		Pf1N1B4_2143	0.56	+0.4
2,454,169	+		Pf1N1B4_2143	0.56	-1.4
2,454,169	+		Pf1N1B4_2143	0.56	+0.4
2,454,169	+		Pf1N1B4_2143	0.56	+0.3
2,454,170	-		Pf1N1B4_2143	0.56	-0.7
2,454,170	-		Pf1N1B4_2143	0.56	+0.1
2,454,170	-		Pf1N1B4_2143	0.56	-0.3
2,454,170	-		Pf1N1B4_2143	0.56	-0.2
2,454,205	-		Pf1N1B4_2143	0.64	+0.7
2,454,383	-				+0.4
2,454,443	-				+2.5
2,454,443	-				-1.9
2,454,444	+				+1.5
2,454,445	-				+0.0
2,454,473	+				+0.8
2,454,502	+				+1.3
2,454,503	-				-0.2
2,454,503	-				+0.3
2,454,533	-				+0.5
2,454,587	+				+0.0
2,454,587	+				+0.4
2,454,587	+				-1.1
2,454,587	+				+0.9
2,454,588	-				-1.1
2,454,588	-				-1.1
2,454,590	+				+1.7
2,454,590	+				+0.6
2,454,590	+				-1.8
2,454,590	+				-0.5
2,454,590	+				-0.5
2,454,590	+				-0.3
2,454,590	+				-0.3
2,454,590	+				-0.0
2,454,590	+				-0.0
2,454,590	+				+1.0
2,454,689	+		Pf1N1B4_2144	0.11	-1.1
2,454,689	+		Pf1N1B4_2144	0.11	+0.3