Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2103

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,414,093	-				+1.0
2,414,107	+				+0.1
2,414,108	-				-1.3
2,414,108	-				+0.7
2,414,147	+		Pf1N1B4_2102	0.11	+0.8
2,414,147	+		Pf1N1B4_2102	0.11	+0.2
2,414,148	-		Pf1N1B4_2102	0.11	-1.2
2,414,148	-		Pf1N1B4_2102	0.11	-0.2
2,414,492	+				+1.5
2,414,492	+				-0.6
2,414,492	+				+1.4
2,414,492	+				-0.3
2,414,492	+				+0.2
2,414,492	+				+0.1
2,414,493	-				+1.7
2,414,504	+				+1.0
2,414,504	+				-1.7
2,414,504	+				+1.8
2,414,505	-				+0.4
2,414,505	-				+0.1
2,414,511	+				+1.5
2,414,511	+				+2.2
2,414,511	+				+0.9
2,414,512	-				+0.3
2,414,553	+				+0.6
2,414,553	+				+1.5
2,414,553	+				-0.6
2,414,554	-				+0.2
2,414,554	-				+0.8
2,414,554	-				+1.4
2,414,554	-				+0.9
2,414,554	-				+0.0
2,414,555	+				-0.3
2,414,555	+				-1.9
2,414,555	+				-1.5
2,414,555	+				-2.6
2,414,555	+				+0.2
2,414,555	+				+0.9
2,414,555	+				+0.8
2,414,555	+				-0.2
2,414,555	+				-0.2
2,414,555	+				+1.0
2,414,555	+				+0.7
2,414,555	+				+0.2
2,414,555	+				+0.9
2,414,555	+				+0.5
2,414,555	+				-0.8
2,414,556	-				-0.8
2,414,556	-				-1.4
2,414,556	-				-0.1
2,414,556	-				+1.2
2,414,556	-				-1.8
2,414,556	-				+0.2
2,414,556	-				-1.6
2,414,556	-				-0.7
2,414,556	-				-1.1
2,414,556	-				-0.7
2,414,556	-				+0.8
2,414,556	-				+0.4
2,414,556	-				+0.4
2,414,556	-				+0.0
2,414,556	-				+1.7
2,414,556	-				-1.3
2,414,556	-				+1.8
2,414,556	-				-0.0
2,414,556	-				-0.1
2,414,556	-				-2.3
2,414,556	-				+0.2
2,414,556	-				+0.7
2,414,556	-				+0.8
2,414,556	-				+1.2
2,414,556	-				+0.1
2,414,556	-				+0.3
2,414,634	+				-1.5
2,414,634	+				+0.7
2,414,634	+				-1.1
2,414,635	-				+0.5
2,414,635	-				+0.7
2,414,635	-				-0.5
2,414,635	-				+1.5
2,414,653	+				+1.7
2,414,654	-				+1.2
2,414,750	+				-0.6
2,414,750	+				+0.8
2,414,750	+				-0.8
2,414,751	-				+0.9
2,414,751	-				+0.1
2,414,751	-				-1.8
2,414,839	-				+0.6
2,414,839	-				+0.2
2,414,862	+				+0.8
2,414,862	+				+1.2
2,414,995	+				+3.2
2,415,034	-				+1.0
2,415,134	+		Pf1N1B4_2103	0.16	+0.2
2,415,134	+		Pf1N1B4_2103	0.16	-0.3
2,415,135	-		Pf1N1B4_2103	0.16	-1.7
2,415,184	+		Pf1N1B4_2103	0.29	-1.3
2,415,184	+		Pf1N1B4_2103	0.29	+0.1
2,415,184	+		Pf1N1B4_2103	0.29	+0.2
2,415,184	+		Pf1N1B4_2103	0.29	-0.3
2,415,185	-		Pf1N1B4_2103	0.29	+1.8
2,415,239	+		Pf1N1B4_2103	0.43	-0.2
2,415,240	-		Pf1N1B4_2103	0.44	+1.2
2,415,258	+		Pf1N1B4_2103	0.48	-0.2
2,415,258	+		Pf1N1B4_2103	0.48	-0.3
2,415,258	+		Pf1N1B4_2103	0.48	-0.2
2,415,258	+		Pf1N1B4_2103	0.48	+0.8
2,415,258	+		Pf1N1B4_2103	0.48	-2.4
2,415,258	+		Pf1N1B4_2103	0.48	+1.7
2,415,258	+		Pf1N1B4_2103	0.48	-0.3
2,415,258	+		Pf1N1B4_2103	0.48	-1.1
2,415,259	-		Pf1N1B4_2103	0.49	+0.0
2,415,259	-		Pf1N1B4_2103	0.49	+1.1
2,415,344	+		Pf1N1B4_2103	0.71	-0.8
2,415,344	+		Pf1N1B4_2103	0.71	-0.8
2,415,345	-		Pf1N1B4_2103	0.71	+0.7
2,415,345	-		Pf1N1B4_2103	0.71	+0.8
2,415,345	-		Pf1N1B4_2103	0.71	+0.2
2,415,423	+				-0.2
2,415,423	+				+0.8
2,415,423	+				+0.7
2,415,424	-				-0.1
2,415,434	+				-0.3
2,415,434	+				-0.1
2,415,784	+				+0.2
2,415,785	-				+0.1
2,415,785	-				+1.8
2,415,785	-				-0.8
2,415,818	-				+0.1
2,415,876	+		Pf1N1B4_2104	0.15	-1.3
2,415,877	-		Pf1N1B4_2104	0.15	+1.1
2,415,993	+		Pf1N1B4_2104	0.24	+0.5
2,415,993	+		Pf1N1B4_2104	0.24	+0.6
2,415,993	+		Pf1N1B4_2104	0.24	+0.6
2,415,993	+		Pf1N1B4_2104	0.24	+0.2
2,415,993	+		Pf1N1B4_2104	0.24	-1.9
2,415,993	+		Pf1N1B4_2104	0.24	-1.1
2,415,993	+		Pf1N1B4_2104	0.24	-0.6
2,415,994	-		Pf1N1B4_2104	0.24	+0.4
2,415,994	-		Pf1N1B4_2104	0.24	+0.4
2,415,994	-		Pf1N1B4_2104	0.24	+0.2
2,415,994	-		Pf1N1B4_2104	0.24	+0.7
2,415,994	-		Pf1N1B4_2104	0.24	+1.3
2,416,077	+		Pf1N1B4_2104	0.30	-0.8
2,416,107	+		Pf1N1B4_2104	0.32	-0.3
2,416,107	+		Pf1N1B4_2104	0.32	+0.4
2,416,107	+		Pf1N1B4_2104	0.32	+0.0
2,416,108	-		Pf1N1B4_2104	0.32	+2.2
2,416,179	+		Pf1N1B4_2104	0.37	+0.6
2,416,179	+		Pf1N1B4_2104	0.37	+1.7
2,416,179	+		Pf1N1B4_2104	0.37	-1.1
2,416,180	-		Pf1N1B4_2104	0.37	+0.4
2,416,341	+		Pf1N1B4_2104	0.48	+2.2
2,416,342	-		Pf1N1B4_2104	0.49	-0.3
2,416,342	-		Pf1N1B4_2104	0.49	+0.9
2,416,401	-		Pf1N1B4_2104	0.53	+1.7