Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1837

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,111,002	+		Pf1N1B4_1836	0.34	+0.2
2,111,002	+		Pf1N1B4_1836	0.34	+0.5
2,111,002	+		Pf1N1B4_1836	0.34	-1.1
2,111,003	-		Pf1N1B4_1836	0.34	-0.2
2,111,003	-		Pf1N1B4_1836	0.34	-0.2
2,111,003	-		Pf1N1B4_1836	0.34	+0.5
2,111,003	-		Pf1N1B4_1836	0.34	-1.1
2,111,003	-		Pf1N1B4_1836	0.34	+0.4
2,111,224	+		Pf1N1B4_1836	0.56	-0.3
2,111,461	+		Pf1N1B4_1836	0.80	+0.7
2,111,535	-		Pf1N1B4_1836	0.87	-0.8
2,111,536	+		Pf1N1B4_1836	0.88	+0.9
2,111,536	+		Pf1N1B4_1836	0.88	-0.6
2,111,537	-		Pf1N1B4_1836	0.88	+0.4
2,111,650	-				-0.8
2,111,650	-				+1.3
2,111,660	+				+0.3
2,111,660	+				-0.5
2,111,660	+				+2.6
2,111,682	-				-1.1
2,111,718	+				-0.6
2,111,718	+				+0.2
2,111,718	+				+0.2
2,111,718	+				+1.7
2,111,719	-				-0.6
2,111,719	-				-1.0
2,111,719	-				-0.3
2,111,719	-				-1.1
2,111,720	+				-0.5
2,111,720	+				-0.3
2,111,721	-				+0.9
2,111,721	-				-0.2
2,111,731	+				+1.2
2,111,731	+				+1.5
2,111,731	+				+1.0
2,111,731	+				+0.2
2,111,731	+				-1.8
2,111,731	+				-0.9
2,111,731	+				+0.9
2,111,731	+				-1.1
2,111,731	+				-0.8
2,111,732	-				-0.3
2,111,732	-				+0.9
2,111,732	-				+1.2
2,111,746	+				+0.8
2,111,747	-				-0.2
2,111,747	-				-0.3
2,111,748	+				+0.9
2,111,780	+				-2.1
2,111,828	+				+0.6
2,111,829	-				+0.6
2,111,905	-				-1.1
2,111,905	-				-0.3
2,112,118	-		Pf1N1B4_1837	0.51	-1.3
2,112,164	+		Pf1N1B4_1837	0.61	-0.9
2,112,191	+		Pf1N1B4_1837	0.68	-0.1
2,112,331	+				+0.2
2,112,343	-				-0.3
2,112,343	-				-1.0
2,112,343	-				+0.8
2,112,347	+				+2.2
2,112,348	-				+0.2
2,112,348	-				+1.2
2,112,446	-				-0.3
2,112,526	-		Pf1N1B4_1838	0.10	+0.4
2,112,628	+		Pf1N1B4_1838	0.54	+0.7
2,112,628	+		Pf1N1B4_1838	0.54	-0.3
2,112,628	+		Pf1N1B4_1838	0.54	+0.2
2,112,629	-		Pf1N1B4_1838	0.54	-2.6
2,112,715	+				-1.8
2,112,715	+				+0.2
2,112,716	-				+0.2
2,112,716	-				-1.3
2,112,716	-				+0.6
2,112,797	+		Pf1N1B4_1839	0.13	+0.3
2,112,797	+		Pf1N1B4_1839	0.13	-0.7
2,112,797	+		Pf1N1B4_1839	0.13	+0.1
2,112,797	+		Pf1N1B4_1839	0.13	+0.2
2,112,798	-		Pf1N1B4_1839	0.13	+0.2
2,112,798	-		Pf1N1B4_1839	0.13	+0.2
2,112,798	-		Pf1N1B4_1839	0.13	-0.9
2,112,798	-		Pf1N1B4_1839	0.13	+1.1
2,112,823	+		Pf1N1B4_1839	0.19	+0.4
2,112,823	+		Pf1N1B4_1839	0.19	+1.2
2,112,824	-		Pf1N1B4_1839	0.20	+0.1
2,112,825	+		Pf1N1B4_1839	0.20	-1.1
2,112,825	+		Pf1N1B4_1839	0.20	+1.2
2,112,825	+		Pf1N1B4_1839	0.20	-0.8
2,112,825	+		Pf1N1B4_1839	0.20	-1.3
2,112,825	+		Pf1N1B4_1839	0.20	+0.5
2,112,825	+		Pf1N1B4_1839	0.20	-1.2
2,112,825	+		Pf1N1B4_1839	0.20	-0.5
2,112,825	+		Pf1N1B4_1839	0.20	-0.8
2,112,826	-		Pf1N1B4_1839	0.20	+0.2
2,112,826	-		Pf1N1B4_1839	0.20	-1.6
2,112,826	-		Pf1N1B4_1839	0.20	+0.2
2,112,826	-		Pf1N1B4_1839	0.20	+1.0
2,112,826	-		Pf1N1B4_1839	0.20	+1.2
2,112,845	+		Pf1N1B4_1839	0.25	-1.1
2,112,846	-		Pf1N1B4_1839	0.25	+0.5
2,112,872	+		Pf1N1B4_1839	0.31	+0.9
2,112,872	+		Pf1N1B4_1839	0.31	+1.6
2,112,872	+		Pf1N1B4_1839	0.31	-0.8
2,112,873	-		Pf1N1B4_1839	0.31	-0.1
2,112,873	-		Pf1N1B4_1839	0.31	-2.7
2,112,873	-		Pf1N1B4_1839	0.31	-0.2
2,112,888	-		Pf1N1B4_1839	0.35	+0.7
2,112,888	-		Pf1N1B4_1839	0.35	-0.5
2,112,955	+		Pf1N1B4_1839	0.51	+1.2
2,112,956	-		Pf1N1B4_1839	0.51	-1.9
2,112,956	-		Pf1N1B4_1839	0.51	+1.0
2,112,956	-		Pf1N1B4_1839	0.51	-0.8
2,112,961	+		Pf1N1B4_1839	0.52	-1.1
2,112,961	+		Pf1N1B4_1839	0.52	-0.1
2,112,961	+		Pf1N1B4_1839	0.52	-0.6
2,112,961	+		Pf1N1B4_1839	0.52	+0.8
2,112,961	+		Pf1N1B4_1839	0.52	+0.1
2,112,961	+		Pf1N1B4_1839	0.52	-1.3
2,112,962	-		Pf1N1B4_1839	0.52	+1.2
2,112,962	-		Pf1N1B4_1839	0.52	-0.3
2,112,962	-		Pf1N1B4_1839	0.52	-1.6
2,112,962	-		Pf1N1B4_1839	0.52	-0.6
2,112,962	-		Pf1N1B4_1839	0.52	+0.2
2,112,962	-		Pf1N1B4_1839	0.52	+0.2
2,112,992	+		Pf1N1B4_1839	0.60	-0.2
2,112,992	+		Pf1N1B4_1839	0.60	+0.8
2,112,993	-		Pf1N1B4_1839	0.60	-0.1
2,112,993	-		Pf1N1B4_1839	0.60	-0.6
2,112,993	-		Pf1N1B4_1839	0.60	+0.7
2,112,993	-		Pf1N1B4_1839	0.60	-0.3
2,113,183	+				-0.5
2,113,207	+				+0.7
2,113,207	+				+0.2
2,113,207	+				+1.5
2,113,207	+				-2.1
2,113,208	+				+0.6
2,113,208	-				+1.0
2,113,208	-				-0.1
2,113,260	+		Pf1N1B4_1840	0.14	-0.1
2,113,260	+		Pf1N1B4_1840	0.14	-0.2
2,113,261	-		Pf1N1B4_1840	0.14	-1.6
2,113,261	-		Pf1N1B4_1840	0.14	-0.8
2,113,261	-		Pf1N1B4_1840	0.14	-0.5
2,113,261	-		Pf1N1B4_1840	0.14	-1.8
2,113,261	-		Pf1N1B4_1840	0.14	+0.8
2,113,261	-		Pf1N1B4_1840	0.14	-1.6
2,113,288	+		Pf1N1B4_1840	0.21	-0.6
2,113,290	+		Pf1N1B4_1840	0.21	-1.3
2,113,290	+		Pf1N1B4_1840	0.21	-0.3
2,113,291	-		Pf1N1B4_1840	0.21	+0.2
2,113,291	-		Pf1N1B4_1840	0.21	+1.2