Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1787

Experiment: Spectinomycin 0.025 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.025 mg/ml
2,039,546	+		Pf1N1B4_1786	0.62	+2.6
2,039,552	+		Pf1N1B4_1786	0.63	+2.8
2,039,552	+		Pf1N1B4_1786	0.63	+0.9
2,039,553	-		Pf1N1B4_1786	0.63	-1.1
2,039,553	-		Pf1N1B4_1786	0.63	-0.8
2,039,553	-		Pf1N1B4_1786	0.63	-0.4
2,039,576	+		Pf1N1B4_1786	0.64	-0.1
2,039,576	+		Pf1N1B4_1786	0.64	-0.5
2,039,576	+		Pf1N1B4_1786	0.64	+0.5
2,039,576	+		Pf1N1B4_1786	0.64	+0.4
2,039,576	+		Pf1N1B4_1786	0.64	+1.2
2,039,577	-				+0.2
2,039,577	-		Pf1N1B4_1786	0.64	+0.4
2,039,577	-		Pf1N1B4_1786	0.64	+0.1
2,039,577	-		Pf1N1B4_1786	0.64	+2.1
2,039,699	+		Pf1N1B4_1786	0.70	-1.3
2,039,699	+		Pf1N1B4_1786	0.70	+0.2
2,039,700	-		Pf1N1B4_1786	0.70	+0.2
2,039,708	+		Pf1N1B4_1786	0.71	+1.1
2,039,709	-		Pf1N1B4_1786	0.71	-1.1
2,039,747	+		Pf1N1B4_1786	0.73	-0.8
2,039,748	-		Pf1N1B4_1786	0.73	-1.2
2,039,748	-		Pf1N1B4_1786	0.73	+0.8
2,039,802	-		Pf1N1B4_1786	0.76	-0.8
2,039,802	-		Pf1N1B4_1786	0.76	+0.2
2,039,802	-		Pf1N1B4_1786	0.76	-2.1
2,039,858	+		Pf1N1B4_1786	0.78	-0.3
2,039,859	-		Pf1N1B4_1786	0.79	+0.8
2,039,954	+		Pf1N1B4_1786	0.83	+0.2
2,039,955	-		Pf1N1B4_1786	0.83	+0.2
2,039,955	-		Pf1N1B4_1786	0.83	+0.4
2,039,955	-		Pf1N1B4_1786	0.83	+1.7
2,040,075	+		Pf1N1B4_1786	0.90	-1.1
2,040,075	+				+1.2
2,040,075	+		Pf1N1B4_1786	0.90	-2.1
2,040,075	+		Pf1N1B4_1786	0.90	+0.8
2,040,075	+		Pf1N1B4_1786	0.90	-0.6
2,040,075	+		Pf1N1B4_1786	0.90	+0.2
2,040,076	-		Pf1N1B4_1786	0.90	+1.2
2,040,076	-		Pf1N1B4_1786	0.90	+1.0
2,040,076	-		Pf1N1B4_1786	0.90	+0.5
2,040,175	+				-1.3
2,040,176	-				-0.3
2,040,225	-				+1.8
2,040,401	-				+1.2
2,040,401	-				-0.2
2,040,462	-				+1.2
2,040,462	-				-1.3
2,040,488	-				+2.8
2,040,665	+		Pf1N1B4_1787	0.13	+0.5
2,040,665	+		Pf1N1B4_1787	0.13	+0.2
2,040,666	-		Pf1N1B4_1787	0.13	-1.1
2,040,666	-		Pf1N1B4_1787	0.13	+0.5
2,040,666	-		Pf1N1B4_1787	0.13	+0.5
2,040,666	-		Pf1N1B4_1787	0.13	+0.4
2,040,868	+		Pf1N1B4_1787	0.30	-0.8
2,040,868	+		Pf1N1B4_1787	0.30	+0.4
2,040,868	+		Pf1N1B4_1787	0.30	-1.3
2,040,868	+		Pf1N1B4_1787	0.30	+1.2
2,040,868	+		Pf1N1B4_1787	0.30	-0.3
2,040,869	-		Pf1N1B4_1787	0.30	+0.2
2,040,869	-		Pf1N1B4_1787	0.30	-0.3
2,041,021	-		Pf1N1B4_1787	0.42	+0.2
2,041,103	+		Pf1N1B4_1787	0.49	+0.2
2,041,103	+		Pf1N1B4_1787	0.49	+0.1
2,041,103	+		Pf1N1B4_1787	0.49	-0.1
2,041,104	-		Pf1N1B4_1787	0.49	+0.7
2,041,155	+		Pf1N1B4_1787	0.53	+1.2
2,041,156	-		Pf1N1B4_1787	0.53	-0.8
2,041,156	-		Pf1N1B4_1787	0.53	+1.4
2,041,156	-		Pf1N1B4_1787	0.53	-1.8
2,041,156	-		Pf1N1B4_1787	0.53	+0.2
2,041,205	+		Pf1N1B4_1787	0.57	+1.8
2,041,205	+		Pf1N1B4_1787	0.57	+0.2
2,041,205	+		Pf1N1B4_1787	0.57	+1.7
2,041,205	+		Pf1N1B4_1787	0.57	-0.7
2,041,205	+		Pf1N1B4_1787	0.57	+1.2
2,041,205	+		Pf1N1B4_1787	0.57	-2.2
2,041,206	-		Pf1N1B4_1787	0.57	+0.7
2,041,206	-		Pf1N1B4_1787	0.57	+0.9
2,041,337	+		Pf1N1B4_1787	0.68	+1.0
2,041,338	-		Pf1N1B4_1787	0.68	+0.5
2,041,340	+		Pf1N1B4_1787	0.68	+0.1
2,041,340	+		Pf1N1B4_1787	0.68	-0.2
2,041,340	+		Pf1N1B4_1787	0.68	+1.2
2,041,341	-		Pf1N1B4_1787	0.68	+0.2
2,041,547	+		Pf1N1B4_1787	0.85	+2.2
2,041,547	+		Pf1N1B4_1787	0.85	+0.8
2,041,548	-		Pf1N1B4_1787	0.85	+0.2
2,041,622	-				-1.3
2,041,734	-				-0.3
2,041,734	-				-1.2
2,041,734	-				+0.5
2,041,985	+		Pf1N1B4_1788	0.18	-0.3
2,041,985	+		Pf1N1B4_1788	0.18	-0.1
2,041,985	+		Pf1N1B4_1788	0.18	-0.1
2,041,985	+		Pf1N1B4_1788	0.18	+1.6
2,041,985	+		Pf1N1B4_1788	0.18	+1.7
2,041,985	+		Pf1N1B4_1788	0.18	+0.7
2,041,985	+		Pf1N1B4_1788	0.18	-0.8
2,041,985	+		Pf1N1B4_1788	0.18	-1.8
2,041,986	-		Pf1N1B4_1788	0.18	+0.7
2,041,986	-		Pf1N1B4_1788	0.18	-0.8
2,041,986	-				+0.2
2,041,986	-		Pf1N1B4_1788	0.18	-1.2
2,041,986	-		Pf1N1B4_1788	0.18	-0.3
2,042,009	+		Pf1N1B4_1788	0.24	+0.6
2,042,009	+		Pf1N1B4_1788	0.24	+0.8
2,042,009	+		Pf1N1B4_1788	0.24	-0.3
2,042,009	+		Pf1N1B4_1788	0.24	+2.1
2,042,010	-		Pf1N1B4_1788	0.24	-0.3
2,042,010	-		Pf1N1B4_1788	0.24	+2.8
2,042,010	-		Pf1N1B4_1788	0.24	-1.1
2,042,010	-		Pf1N1B4_1788	0.24	-1.3
2,042,010	-		Pf1N1B4_1788	0.24	-0.6
2,042,010	-		Pf1N1B4_1788	0.24	-0.8
2,042,012	+		Pf1N1B4_1788	0.24	+1.5
2,042,012	+		Pf1N1B4_1788	0.24	-2.8
2,042,012	+		Pf1N1B4_1788	0.24	-0.1
2,042,012	+		Pf1N1B4_1788	0.24	+0.7
2,042,013	-		Pf1N1B4_1788	0.25	-0.7
2,042,013	-		Pf1N1B4_1788	0.25	+0.8
2,042,013	-		Pf1N1B4_1788	0.25	-0.8
2,042,042	+		Pf1N1B4_1788	0.31	+0.4
2,042,042	+		Pf1N1B4_1788	0.31	+0.1
2,042,043	-		Pf1N1B4_1788	0.31	+0.6
2,042,043	-		Pf1N1B4_1788	0.31	-0.9
2,042,043	-		Pf1N1B4_1788	0.31	-1.1
2,042,043	-		Pf1N1B4_1788	0.31	+0.5
2,042,117	+		Pf1N1B4_1788	0.49	-1.1
2,042,117	+		Pf1N1B4_1788	0.49	+0.5
2,042,117	+		Pf1N1B4_1788	0.49	-0.5
2,042,118	-		Pf1N1B4_1788	0.49	-0.2
2,042,118	-		Pf1N1B4_1788	0.49	-1.2
2,042,118	-		Pf1N1B4_1788	0.49	-0.1
2,042,118	-		Pf1N1B4_1788	0.49	-1.8
2,042,196	-		Pf1N1B4_1788	0.67	+0.9
2,042,383	-				-1.9
2,042,428	+				+0.9
2,042,428	+				+0.3
2,042,428	+				+2.1
2,042,428	+				+0.2
2,042,429	-				+1.0
2,042,429	-				-0.5
2,042,429	-				-2.3
2,042,429	-				-0.9
2,042,429	-				-0.0
2,042,429	-				-0.3
2,042,503	-		Pf1N1B4_1789	0.19	+0.7
2,042,503	-		Pf1N1B4_1789	0.19	+0.3
2,042,503	-		Pf1N1B4_1789	0.19	+0.7
2,042,553	+		Pf1N1B4_1789	0.30	-1.3
2,042,553	+		Pf1N1B4_1789	0.30	+1.0
2,042,553	+		Pf1N1B4_1789	0.30	+0.2
2,042,553	+		Pf1N1B4_1789	0.30	+0.7
2,042,553	+		Pf1N1B4_1789	0.30	-0.9
2,042,553	+		Pf1N1B4_1789	0.30	+0.1
2,042,553	+		Pf1N1B4_1789	0.30	-1.1
2,042,554	-		Pf1N1B4_1789	0.30	+0.5
2,042,554	-		Pf1N1B4_1789	0.30	+1.5
2,042,554	-		Pf1N1B4_1789	0.30	-1.2
2,042,554	-		Pf1N1B4_1789	0.30	-1.0
2,042,554	-		Pf1N1B4_1789	0.30	-2.8
2,042,554	-		Pf1N1B4_1789	0.30	+0.8
2,042,554	-		Pf1N1B4_1789	0.30	-1.1
2,042,554	-		Pf1N1B4_1789	0.30	+0.2
2,042,554	-		Pf1N1B4_1789	0.30	-0.5
2,042,554	-		Pf1N1B4_1789	0.30	+0.4
2,042,554	-		Pf1N1B4_1789	0.30	+0.2
2,042,554	-		Pf1N1B4_1789	0.30	-0.7
2,042,554	-		Pf1N1B4_1789	0.30	-0.9
2,042,554	-		Pf1N1B4_1789	0.30	-1.3
2,042,641	+		Pf1N1B4_1789	0.48	+1.2