Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02266

Experiment: PYE with Nickel (II) chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.3 mM
2,418,189	-		CCNA_02264	0.28	+0.8
2,418,205	+		CCNA_02264	0.31	-0.8
2,418,255	-		CCNA_02264	0.40	+1.0
2,418,290	-		CCNA_02264	0.46	+1.1
2,418,317	-		CCNA_02264	0.51	-0.3
2,418,320	+		CCNA_02264	0.51	-1.1
2,418,322	-		CCNA_02264	0.52	-1.5
2,418,325	+		CCNA_02264	0.52	-1.6
2,418,338	-		CCNA_02264	0.54	+0.9
2,418,352	+		CCNA_02264	0.57	-0.4
2,418,373	+		CCNA_02264	0.60	-0.7
2,418,415	+		CCNA_02264	0.68	-1.0
2,418,423	-		CCNA_02264	0.69	+0.1
2,418,423	-		CCNA_02264	0.69	-0.9
2,418,513	+		CCNA_02264	0.85	+0.6
2,418,529	+		CCNA_02264	0.88	+0.2
2,418,535	+		CCNA_02264	0.89	-0.4
2,418,535	+		CCNA_02264	0.89	-1.6
2,418,543	-				-0.4
2,418,598	+				+0.9
2,418,604	-				-1.2
2,418,636	+				-1.2
2,418,684	+				+0.6
2,418,684	+				+0.0
2,418,684	+				-1.6
2,418,684	+				-2.2
2,418,692	-				+0.8
2,418,692	-				-1.0
2,418,692	-				-0.5
2,418,692	-				+0.3
2,418,761	+		CCNA_02265	0.23	-1.0
2,418,774	-		CCNA_02265	0.25	-0.2
2,418,805	-		CCNA_02265	0.32	-1.5
2,418,856	+		CCNA_02265	0.42	+0.6
2,418,864	-		CCNA_02265	0.44	-1.6
2,418,864	-				+1.1
2,418,868	+		CCNA_02265	0.45	-0.1
2,418,868	+		CCNA_02265	0.45	-1.6
2,418,874	+		CCNA_02265	0.46	-0.6
2,418,900	+		CCNA_02265	0.51	+0.9
2,418,930	-		CCNA_02265	0.58	-1.2
2,418,955	+		CCNA_02265	0.63	-0.4
2,419,012	-		CCNA_02265	0.75	-0.8
2,419,012	-		CCNA_02265	0.75	+0.7
2,419,050	-		CCNA_02265	0.83	-2.6
2,419,091	+				+0.7
2,419,099	-				+0.9
2,419,215	+				+0.6
2,419,217	-				+1.8
2,419,264	+				-0.2
2,419,363	-		CCNA_02266	0.16	+0.3
2,419,368	+		CCNA_02266	0.17	-1.2
2,419,409	+		CCNA_02266	0.21	+0.1
2,419,527	-		CCNA_02266	0.32	+1.4
2,419,537	-		CCNA_02266	0.33	+0.2
2,419,553	-		CCNA_02266	0.34	-2.4
2,419,553	-		CCNA_02266	0.34	+0.3
2,419,619	-		CCNA_02266	0.40	+0.1
2,419,619	-		CCNA_02266	0.40	-0.6
2,419,625	+		CCNA_02266	0.41	+0.3
2,419,625	+		CCNA_02266	0.41	+0.0
2,419,625	+		CCNA_02266	0.41	+0.5
2,419,630	+		CCNA_02266	0.41	+0.3
2,419,630	+		CCNA_02266	0.41	+0.2
2,419,630	+		CCNA_02266	0.41	-0.1
2,419,633	-		CCNA_02266	0.42	+0.2
2,419,638	-		CCNA_02266	0.42	-0.6
2,419,638	-		CCNA_02266	0.42	-1.2
2,419,700	-		CCNA_02266	0.48	-1.5
2,419,700	-		CCNA_02266	0.48	-1.0
2,419,700	-		CCNA_02266	0.48	-1.3
2,419,700	-		CCNA_02266	0.48	-0.5
2,419,700	-		CCNA_02266	0.48	-0.1
2,419,706	+		CCNA_02266	0.49	-1.2
2,419,706	+		CCNA_02266	0.49	-1.3
2,419,790	+		CCNA_02266	0.56	-1.1
2,419,790	+		CCNA_02266	0.56	-1.2
2,419,798	-		CCNA_02266	0.57	+0.1
2,419,798	-		CCNA_02266	0.57	-1.3
2,419,798	-		CCNA_02266	0.57	+1.1
2,419,811	+		CCNA_02266	0.58	-0.2
2,419,817	-		CCNA_02266	0.59	-0.6
2,419,913	-		CCNA_02266	0.68	-0.4
2,419,945	-		CCNA_02266	0.71	-1.0
2,419,945	-		CCNA_02266	0.71	-0.2
2,419,962	+		CCNA_02266	0.73	+0.0
2,420,046	+		CCNA_02266	0.80	+0.0
2,420,052	+		CCNA_02266	0.81	+0.0
2,420,060	-		CCNA_02266	0.82	+0.6
2,420,072	+		CCNA_02266	0.83	-0.1
2,420,080	-		CCNA_02266	0.84	+0.9
2,420,090	-		CCNA_02266	0.85	-0.4
2,420,106	+		CCNA_02266	0.86	-1.0
2,420,106	+		CCNA_02266	0.86	-1.2
2,420,114	-		CCNA_02266	0.87	+1.1
2,420,114	-		CCNA_02266	0.87	-0.6
2,420,114	-		CCNA_02266	0.87	+0.8
2,420,152	+				-1.2
2,420,153	+				+0.6
2,420,153	+				+0.8
2,420,161	-				+0.8
2,420,161	-				-0.4
2,420,171	-				+0.5
2,420,171	-				-1.0
2,420,171	-				+0.7
2,420,171	-				-1.8
2,420,171	-				-0.3
2,420,178	+				-0.3
2,420,178	+				-1.1
2,420,186	-				+0.7
2,420,186	-				-1.1
2,420,217	-				-0.5
2,420,238	+				-1.0
2,420,241	-				+0.3
2,420,243	+				+0.1
2,420,310	+				+0.5
2,420,320	+				-0.4
2,420,328	-				+0.5
2,420,361	+				+2.1
2,420,361	+				-0.7
2,420,367	-				+0.5
2,420,372	+				-2.1
2,420,372	+				-0.6
2,420,393	+				-1.0
2,420,407	+				+0.4
2,420,415	-				+1.1
2,420,417	+				-1.1
2,420,428	-		CCNA_02267	0.10	+0.0
2,420,454	+		CCNA_02267	0.14	-0.7
2,420,460	+		CCNA_02267	0.15	+0.6
2,420,462	-		CCNA_02267	0.16	+0.0
2,420,462	-		CCNA_02267	0.16	+1.5
2,420,465	+		CCNA_02267	0.16	+0.4
2,420,465	+		CCNA_02267	0.16	-1.4
2,420,473	-		CCNA_02267	0.17	+0.4
2,420,503	+		CCNA_02267	0.22	-0.6
2,420,516	-		CCNA_02267	0.24	+2.8
2,420,516	-		CCNA_02267	0.24	+0.6
2,420,534	+		CCNA_02267	0.27	+0.2
2,420,542	-		CCNA_02267	0.29	-0.5
2,420,542	-		CCNA_02267	0.29	+0.4
2,420,575	+		CCNA_02267	0.34	+0.6
2,420,579	+		CCNA_02267	0.34	+1.1
2,420,598	-		CCNA_02267	0.38	-0.8
2,420,735	-		CCNA_02267	0.59	+0.2
2,420,745	-		CCNA_02267	0.61	+0.7
2,420,809	+		CCNA_02267	0.71	-0.6
2,420,857	-		CCNA_02267	0.79	+0.3
2,420,857	-		CCNA_02267	0.79	+3.4
2,420,886	-		CCNA_02267	0.84	+0.2
2,420,895	+		CCNA_02267	0.85	-0.7
2,420,895	+				+2.5
2,420,903	-		CCNA_02267	0.86	-0.8
2,420,944	-				-1.0
2,420,969	-				-0.2
2,421,008	+		CCNA_02268	0.11	+0.4
2,421,055	+		CCNA_02268	0.18	+1.3
2,421,077	-		CCNA_02268	0.21	+2.7
2,421,091	+		CCNA_02268	0.24	-1.3
2,421,092	+		CCNA_02268	0.24	+2.5
2,421,094	-		CCNA_02268	0.24	-0.8
2,421,100	-		CCNA_02268	0.25	+0.4
2,421,125	+		CCNA_02268	0.29	-0.2
2,421,132	-		CCNA_02268	0.30	-1.4
2,421,139	+		CCNA_02268	0.31	+0.5
2,421,147	-		CCNA_02268	0.32	+1.5
2,421,147	-		CCNA_02268	0.32	+2.3
2,421,147	-		CCNA_02268	0.32	-1.0
2,421,147	-		CCNA_02268	0.32	-1.1
2,421,147	-		CCNA_02268	0.32	-0.8
2,421,147	-		CCNA_02268	0.32	+0.2
2,421,149	+		CCNA_02268	0.33	-0.7
2,421,150	+		CCNA_02268	0.33	+1.3
2,421,157	-		CCNA_02268	0.34	-1.2
2,421,160	+		CCNA_02268	0.34	+0.8
2,421,210	-		CCNA_02268	0.42	+0.6
2,421,221	-		CCNA_02268	0.44	+0.8
2,421,226	-		CCNA_02268	0.44	-1.4
2,421,229	+		CCNA_02268	0.45	+0.3
2,421,236	+		CCNA_02268	0.46	-1.5
2,421,236	+		CCNA_02268	0.46	-1.0
2,421,236	+		CCNA_02268	0.46	-0.9
2,421,236	+		CCNA_02268	0.46	+1.3
2,421,236	+		CCNA_02268	0.46	+0.2
2,421,236	+				+1.5
2,421,236	+		CCNA_02268	0.46	-0.4
2,421,237	-		CCNA_02268	0.46	+0.4
2,421,249	-		CCNA_02268	0.48	-1.0
2,421,249	-		CCNA_02268	0.48	-1.4
2,421,249	-		CCNA_02268	0.48	+0.3