Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01478

Experiment: PYE with Nickel (II) chloride 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.3 mM
1,584,603	-		CCNA_01477	0.27	-0.0
1,584,623	+		CCNA_01477	0.28	-1.6
1,584,623	+		CCNA_01477	0.28	-0.8
1,584,650	-		CCNA_01477	0.30	+1.0
1,584,654	+		CCNA_01477	0.31	+1.1
1,584,660	-		CCNA_01477	0.31	+1.0
1,584,695	-		CCNA_01477	0.34	-0.6
1,584,719	+		CCNA_01477	0.35	-1.1
1,584,747	+		CCNA_01477	0.37	-1.5
1,584,754	+		CCNA_01477	0.38	+0.2
1,584,819	+		CCNA_01477	0.43	-1.1
1,584,835	+		CCNA_01477	0.44	-0.1
1,584,835	-		CCNA_01477	0.44	+2.1
1,584,856	+		CCNA_01477	0.45	-0.4
1,584,864	-		CCNA_01477	0.46	+0.8
1,584,866	+		CCNA_01477	0.46	+0.0
1,584,874	-		CCNA_01477	0.47	+1.0
1,584,882	+		CCNA_01477	0.47	+2.1
1,584,900	+		CCNA_01477	0.49	-1.3
1,584,939	+		CCNA_01477	0.51	-0.6
1,584,939	+		CCNA_01477	0.51	-0.4
1,584,947	-		CCNA_01477	0.52	+0.2
1,584,947	-		CCNA_01477	0.52	+1.3
1,584,951	+		CCNA_01477	0.52	+0.3
1,584,951	+		CCNA_01477	0.52	+1.8
1,585,014	-		CCNA_01477	0.57	-0.2
1,585,062	+		CCNA_01477	0.60	+0.4
1,585,062	+		CCNA_01477	0.60	-0.3
1,585,062	+		CCNA_01477	0.60	-0.5
1,585,083	+		CCNA_01477	0.62	+1.6
1,585,093	+		CCNA_01477	0.63	-0.9
1,585,101	-		CCNA_01477	0.63	-1.3
1,585,121	+		CCNA_01477	0.65	-0.8
1,585,121	-		CCNA_01477	0.65	+0.4
1,585,194	+		CCNA_01477	0.70	+0.2
1,585,209	+		CCNA_01477	0.71	+0.2
1,585,245	+		CCNA_01477	0.74	+0.8
1,585,254	-		CCNA_01477	0.75	+0.1
1,585,322	+		CCNA_01477	0.79	-0.6
1,585,327	+		CCNA_01477	0.80	+1.1
1,585,329	+		CCNA_01477	0.80	-2.0
1,585,329	+		CCNA_01477	0.80	-0.1
1,585,329	+		CCNA_01477	0.80	+2.1
1,585,415	+		CCNA_01477	0.86	+1.1
1,585,450	+		CCNA_01477	0.89	-0.9
1,585,450	+		CCNA_01477	0.89	+2.0
1,585,497	+				+1.0
1,585,505	-				-0.3
1,585,505	-				+2.6
1,585,586	+				+0.6
1,585,586	+				+0.8
1,585,586	+				-0.8
1,585,586	+				+0.2
1,585,586	+				+0.1
1,585,594	-				-0.9
1,585,594	-				-1.7
1,585,594	-				+0.1
1,585,594	-				-1.3
1,585,594	-				+0.7
1,585,594	-				+0.2
1,585,596	+				-0.4
1,585,596	+				+0.2
1,585,596	+				-0.1
1,585,596	+				+0.1
1,585,604	-				-2.4
1,585,604	-				+1.3
1,585,604	-				-0.6
1,585,604	-				-0.7
1,585,604	-				-1.7
1,585,604	-				-0.6
1,585,611	-				-0.9
1,585,626	+				-0.6
1,585,626	+				-0.5
1,585,683	+		CCNA_01478	0.11	+0.2
1,585,683	+		CCNA_01478	0.11	-1.3
1,585,691	-		CCNA_01478	0.12	-0.2
1,585,691	-		CCNA_01478	0.12	-1.3
1,585,715	+		CCNA_01478	0.16	-0.4
1,585,715	+		CCNA_01478	0.16	+0.1
1,585,715	+		CCNA_01478	0.16	+0.4
1,585,715	+		CCNA_01478	0.16	+0.1
1,585,716	-		CCNA_01478	0.16	-0.2
1,585,723	-		CCNA_01478	0.17	-0.9
1,585,723	-		CCNA_01478	0.17	-0.3
1,585,770	-		CCNA_01478	0.23	-1.4
1,585,780	-		CCNA_01478	0.24	+0.6
1,585,818	+		CCNA_01478	0.29	-0.8
1,585,820	+		CCNA_01478	0.30	-0.9
1,585,827	+		CCNA_01478	0.31	+0.7
1,585,833	-		CCNA_01478	0.31	-1.1
1,585,892	-		CCNA_01478	0.39	+0.6
1,585,895	+		CCNA_01478	0.40	-0.2
1,585,908	-		CCNA_01478	0.41	+0.2
1,585,942	-		CCNA_01478	0.46	+1.3
1,585,944	+		CCNA_01478	0.46	-1.4
1,585,994	+		CCNA_01478	0.53	-0.4
1,585,994	-		CCNA_01478	0.53	+0.1
1,586,018	-		CCNA_01478	0.56	-0.2
1,586,019	+		CCNA_01478	0.56	+0.2
1,586,029	+		CCNA_01478	0.58	+0.6
1,586,029	+		CCNA_01478	0.58	-0.0
1,586,037	-		CCNA_01478	0.59	-1.0
1,586,062	+		CCNA_01478	0.62	-0.0
1,586,062	+		CCNA_01478	0.62	-0.3
1,586,082	-		CCNA_01478	0.65	+0.7
1,586,104	-		CCNA_01478	0.68	-0.5
1,586,117	+		CCNA_01478	0.69	+0.8
1,586,117	+		CCNA_01478	0.69	-0.8
1,586,149	-		CCNA_01478	0.74	-0.8
1,586,180	+		CCNA_01478	0.78	-0.3
1,586,180	+		CCNA_01478	0.78	+1.6
1,586,188	-		CCNA_01478	0.79	-0.3
1,586,268	-		CCNA_01478	0.90	-0.1
1,586,276	+				+0.4
1,586,276	+				-1.5
1,586,276	+				+0.7
1,586,284	-				+1.1
1,586,299	+				+0.3
1,586,299	+				+1.0
1,586,323	-				-1.2
1,586,347	+				+0.1
1,586,350	-				-0.2
1,586,353	+				-1.1
1,586,353	+				+0.2
1,586,353	+				-1.6
1,586,361	-				-0.2
1,586,388	+				+0.1
1,586,405	+				-0.3
1,586,413	-				+1.0
1,586,415	+				-1.3
1,586,415	+				-1.0
1,586,423	-				+0.3
1,586,431	+				-0.3
1,586,439	-				+0.9
1,586,456	-				-0.4
1,586,457	+				+0.3
1,586,461	+				+0.4
1,586,489	+				+1.3
1,586,523	+				+1.1
1,586,523	+				-0.2
1,586,523	+				+1.6
1,586,523	+				+0.1
1,586,531	-				-0.9
1,586,531	-				-0.6
1,586,531	-				-0.9
1,586,531	-				-0.9
1,586,531	-				+2.7
1,586,531	-				-0.8
1,586,531	-				+0.7
1,586,531	-				+0.8
1,586,594	+		CCNA_01479	0.10	-1.7
1,586,594	+		CCNA_01479	0.10	-0.4
1,586,594	+		CCNA_01479	0.10	-1.5
1,586,594	+		CCNA_01479	0.10	+0.9
1,586,594	+		CCNA_01479	0.10	-0.2
1,586,594	+		CCNA_01479	0.10	-0.7
1,586,595	+		CCNA_01479	0.10	-1.2
1,586,602	-		CCNA_01479	0.11	-0.5
1,586,602	-		CCNA_01479	0.11	+0.4
1,586,602	-		CCNA_01479	0.11	-1.7
1,586,602	-		CCNA_01479	0.11	-0.0
1,586,655	-		CCNA_01479	0.13	-0.2
1,586,692	-		CCNA_01479	0.15	-2.1
1,586,707	-		CCNA_01479	0.16	+0.4
1,586,729	-		CCNA_01479	0.17	-0.6
1,586,732	+		CCNA_01479	0.17	-0.2
1,586,738	+		CCNA_01479	0.17	+2.1
1,586,755	+		CCNA_01479	0.18	+1.3
1,586,808	+		CCNA_01479	0.21	+0.4
1,586,835	+		CCNA_01479	0.22	+1.0
1,586,845	+		CCNA_01479	0.22	-0.3
1,586,883	+		CCNA_01479	0.24	+0.4
1,586,883	+		CCNA_01479	0.24	-0.8
1,586,883	+		CCNA_01479	0.24	+0.8
1,586,883	+		CCNA_01479	0.24	+0.6
1,586,891	-		CCNA_01479	0.25	+1.3
1,586,891	-		CCNA_01479	0.25	+0.2
1,586,912	+		CCNA_01479	0.26	-1.2
1,586,919	+		CCNA_01479	0.26	+0.8
1,586,919	+		CCNA_01479	0.26	-1.3
1,586,924	+		CCNA_01479	0.26	-0.8
1,586,926	+		CCNA_01479	0.26	+0.4
1,586,936	+		CCNA_01479	0.27	-1.5
1,586,949	-		CCNA_01479	0.28	+0.7
1,586,959	-		CCNA_01479	0.28	-0.7
1,586,994	+		CCNA_01479	0.30	+0.4
1,586,994	+		CCNA_01479	0.30	-0.4
1,587,044	+		CCNA_01479	0.32	-1.5
1,587,051	+		CCNA_01479	0.32	-0.7
1,587,136	-		CCNA_01479	0.37	+0.8
1,587,183	-		CCNA_01479	0.39	-0.1
1,587,189	-		CCNA_01479	0.39	+0.8
1,587,236	+		CCNA_01479	0.41	+0.1
1,587,236	+		CCNA_01479	0.41	-1.3
1,587,236	+		CCNA_01479	0.41	+1.4
1,587,236	+		CCNA_01479	0.41	+0.7
1,587,236	+		CCNA_01479	0.41	+0.3
1,587,244	-		CCNA_01479	0.42	+0.7
1,587,244	-		CCNA_01479	0.42	+1.4
1,587,244	-		CCNA_01479	0.42	+0.1
1,587,244	-		CCNA_01479	0.42	-0.4
1,587,288	+		CCNA_01479	0.44	-0.4
1,587,288	+		CCNA_01479	0.44	-0.2
1,587,330	-		CCNA_01479	0.46	+1.1
1,587,335	+		CCNA_01479	0.46	-0.3
1,587,343	-		CCNA_01479	0.47	-0.6