Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS08985 and CA265_RS08990 are separated by 343 nucleotides CA265_RS08990 and CA265_RS08995 are separated by 83 nucleotides
CA265_RS08985: CA265_RS08985 - polyribonucleotide nucleotidyltransferase, at 2,240,133 to 2,242,268
_RS08985
CA265_RS08990: CA265_RS08990 - ribulose-phosphate 3-epimerase, at 2,242,612 to 2,243,283
_RS08990
CA265_RS08995: CA265_RS08995 - TonB-dependent receptor, at 2,243,367 to 2,245,793
_RS08995
Position (kb)
2242
2243
2244 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2242.347 kb on + strand at 2242.388 kb on + strand at 2242.510 kb on - strand at 2243.278 kb on - strand at 2243.281 kb on + strand at 2243.359 kb on + strand at 2243.458 kb on - strand at 2243.526 kb on - strand at 2243.545 kb on - strand at 2243.553 kb on + strand at 2243.580 kb on - strand at 2243.662 kb on + strand, within CA265_RS08995 at 2243.738 kb on + strand, within CA265_RS08995 at 2243.831 kb on - strand, within CA265_RS08995 at 2243.859 kb on - strand, within CA265_RS08995 at 2243.882 kb on + strand, within CA265_RS08995 at 2244.027 kb on - strand, within CA265_RS08995 at 2244.042 kb on + strand, within CA265_RS08995 at 2244.088 kb on + strand, within CA265_RS08995 at 2244.108 kb on - strand, within CA265_RS08995 at 2244.145 kb on + strand, within CA265_RS08995 at 2244.152 kb on + strand, within CA265_RS08995 at 2244.169 kb on + strand, within CA265_RS08995 at 2244.198 kb on + strand, within CA265_RS08995 at 2244.199 kb on - strand, within CA265_RS08995 at 2244.200 kb on + strand, within CA265_RS08995 at 2244.237 kb on + strand, within CA265_RS08995
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 2,242,347 + +0.3 2,242,388 + -0.1 2,242,510 - -0.3 2,243,278 - -1.7 2,243,281 + -0.4 2,243,359 + -0.1 2,243,458 - -0.1 2,243,526 - -1.9 2,243,545 - -0.8 2,243,553 + +1.3 2,243,580 - -0.2 2,243,662 + CA265_RS08995 0.12 +1.4 2,243,738 + CA265_RS08995 0.15 -0.3 2,243,831 - CA265_RS08995 0.19 -1.0 2,243,859 - CA265_RS08995 0.20 -0.1 2,243,882 + CA265_RS08995 0.21 +1.3 2,244,027 - CA265_RS08995 0.27 +3.3 2,244,042 + CA265_RS08995 0.28 -0.6 2,244,088 + CA265_RS08995 0.30 -0.2 2,244,108 - CA265_RS08995 0.31 -0.5 2,244,145 + CA265_RS08995 0.32 +0.0 2,244,152 + CA265_RS08995 0.32 +0.2 2,244,169 + CA265_RS08995 0.33 +0.3 2,244,198 + CA265_RS08995 0.34 +0.2 2,244,199 - CA265_RS08995 0.34 +0.4 2,244,200 + CA265_RS08995 0.34 -0.1 2,244,237 + CA265_RS08995 0.36 +0.3
Or see this region's nucleotide sequence