Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5447

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
191,430	+				+2.3
191,432	+				-0.1
191,433	-				+0.7
191,478	+				+0.7
191,537	+				+2.9
191,537	+				-1.3
191,537	+				+0.7
191,537	+				+0.7
191,537	+				+0.9
191,537	+				+0.5
191,537	+				+1.1
191,538	-				+1.5
191,538	-				+0.5
191,538	-				+0.3
191,538	-				-0.1
191,538	-				-0.5
191,538	-				-3.0
191,541	+				+1.5
191,542	-				+0.1
191,576	-				+0.9
191,576	-				+0.1
191,603	-				-1.8
191,615	+				-0.3
191,616	-				+0.4
191,628	+				+1.5
191,628	+				+1.3
191,628	+				+1.0
191,628	+				+0.6
191,628	+				+0.5
191,628	+				+0.1
191,628	+				+0.9
191,629	-				+0.1
191,629	-				-0.2
191,629	-				-0.2
191,629	-				+2.1
191,632	+				+0.5
191,697	+				-0.4
191,697	+				+0.4
191,698	-				-1.9
191,716	+				-1.1
191,717	-				-1.0
191,717	-				-0.8
191,717	-				-2.6
191,719	+				+0.2
191,720	-				+0.1
191,720	-				-0.3
191,720	-				+1.0
191,720	-				-0.5
191,720	-				+0.5
191,737	+				+1.3
191,738	-				-2.6
191,781	-				+0.9
191,802	-				+0.7
191,802	-				+0.3
191,802	-				+0.5
191,815	-				+1.1
191,815	-				+0.0
191,815	-				-1.3
191,836	+				+0.2
191,837	-				-0.7
191,837	-				-1.6
191,851	+				+0.1
191,852	-				-1.6
191,881	-				-1.8
191,892	+				-0.5
191,893	-				-0.5
191,893	-				+0.5
191,893	-				-1.5
191,906	+				+1.7
191,906	+				-0.5
191,907	-				-0.1
191,907	-				+0.1
191,907	-				-1.0
191,907	-				+0.0
191,927	+				+0.3
191,927	+				-0.9
191,927	+				-0.3
191,927	+				-0.2
191,927	+				+0.7
191,927	+				-2.0
191,928	-				-0.8
191,928	-				-0.5
191,928	-				-1.0
191,928	-				+1.3
191,928	-				-0.8
191,928	-				+1.3
191,928	-				+1.5
191,928	-				-0.9
191,928	-				+0.3
191,928	-				+0.4
191,928	-				-0.6
191,928	-				-0.0
192,086	-				-1.0
192,086	-				-1.6
192,086	-				+0.7
192,129	-				-0.6
192,137	+				-0.2
192,137	+				-1.5
192,172	-		Pf1N1B4_5446	0.20	-1.3
192,229	+		Pf1N1B4_5446	0.52	-1.9
192,229	+		Pf1N1B4_5446	0.52	-0.8
192,230	-		Pf1N1B4_5446	0.52	-0.1
192,230	-		Pf1N1B4_5446	0.52	-1.5
192,230	-		Pf1N1B4_5446	0.52	-2.5
192,249	-		Pf1N1B4_5446	0.63	-1.4
192,387	+		Pf1N1B4_5447	0.13	-1.3
192,388	-		Pf1N1B4_5447	0.13	-2.6
192,388	-		Pf1N1B4_5447	0.13	-1.5
192,388	-		Pf1N1B4_5447	0.13	+0.1
192,388	-		Pf1N1B4_5447	0.13	-0.5
192,412	+		Pf1N1B4_5447	0.26	+0.3
192,441	-				-0.5
192,441	-		Pf1N1B4_5447	0.41	-0.7
192,441	-				-0.5
192,540	+				-0.3
192,540	+				-1.0
192,541	-				+0.3
192,541	-				+0.1
192,541	-				-0.3
192,541	-				-1.0
192,541	-				+0.5
192,551	+				+0.5
192,552	-				+0.0
192,552	-				-0.0
192,571	-				-0.3
192,573	+				-0.1
192,574	-				-0.0
192,574	-				-1.0
192,635	-				+1.3
192,671	-				+0.1
192,671	-				-0.8
192,671	-				-0.8
192,677	+				+0.7
192,677	+				+0.2
192,678	-				-1.0
192,678	-				+0.1
192,678	-				+0.9
192,678	-				+0.3
192,678	-				+0.9
192,678	-				-0.2
192,678	-				+0.1
192,678	-				+0.5
192,678	-				-0.6
192,678	-				-0.7
192,678	-				-1.3
192,678	-				+0.1
192,678	-				-0.4
192,678	-				-0.3
192,678	-				-0.5
192,678	-				+1.0
192,678	-				+0.7
192,678	-				+0.2
192,678	-				+0.7
192,678	-				-1.4
192,733	-				-0.1
192,733	-				-1.8
192,733	-				+1.2
192,733	-				-1.7
192,740	+				+0.9
192,741	-				+1.4
192,741	-				-0.5
192,741	-				-0.7
192,741	-				+0.3
192,741	-				-0.4
192,761	+				+0.4
192,761	+				+1.9
192,761	+				+1.3
192,761	+				-1.0
192,762	-				+1.5
192,762	-				+0.4
192,762	-				-0.8
192,762	-				+0.7
192,762	-				+0.1
192,762	-				-0.1
192,762	-				-0.2
192,762	-				-0.5
192,762	-				+1.5
192,762	-				-0.9
192,762	-				+0.2
192,762	-				-0.7
192,762	-				+0.8
192,762	-				+0.5
192,762	-				+0.1
192,762	-				+0.6
192,762	-				-1.5
192,762	-				-0.5
192,762	-				-0.3
192,762	-				-0.9
192,762	-				+2.1
192,853	-				+1.3
192,853	-				-0.2
192,853	-				+0.3
192,863	-				-0.4
192,863	-				-0.5
192,863	-				+0.3
192,863	-				+0.3
192,863	-				+0.9
192,863	-				+1.5
192,863	-				+0.2
192,863	-				+0.0
192,863	-				+0.1
192,863	-				-0.1
192,863	-				-1.0
192,934	-				-0.8
192,934	-				-1.0
192,945	-				-0.0
192,945	-				+0.3
192,945	-				+0.2
193,010	-				-1.0
193,066	-				+0.5
193,066	-				-1.0
193,123	+				+0.7
193,146	+				-0.3
193,147	-				-1.6
193,147	-				+0.5
193,170	-				+0.4
193,170	-				-0.7
193,208	+				+0.6
193,209	-				+0.9
193,209	-				-2.0
193,267	-				+0.2
193,267	-				+0.1
193,267	-				-0.1
193,267	-				-0.8
193,329	-				-0.2
193,329	-				+0.5
193,329	-				+1.0
193,335	-				+1.0
193,335	-				+0.3
193,335	-				+0.5
193,335	-				-1.0
193,335	-				-0.2
193,335	-				-2.9
193,335	-				+1.0
193,335	-				-0.5
193,335	-				+0.5
193,340	+				+0.0
193,341	-				-0.5
193,341	-				-0.7
193,341	-				+1.5
193,369	-				+1.5
193,383	+				-0.9
193,399	+				+1.0
193,449	+				+0.3
193,450	-				-0.7
193,552	-				+1.0
193,552	-				+0.3