Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4633
Experiment: Tetracycline 0.0004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Tetracycline 0.0004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,108,864 | + | Pf1N1B4_4632 | 0.84 | +1.3 | |
| 5,108,864 | + | Pf1N1B4_4632 | 0.84 | -1.3 | |
| 5,108,865 | - | Pf1N1B4_4632 | 0.84 | -0.8 | |
| 5,109,173 | + | -0.2 | |||
| 5,109,474 | + | +0.6 | |||
| 5,109,474 | + | -0.2 | |||
| 5,109,533 | - | +0.1 | |||
| 5,110,028 | - | Pf1N1B4_4633 | 0.46 | +2.1 | |
| 5,110,222 | + | Pf1N1B4_4633 | 0.61 | -0.5 | |
| 5,110,222 | + | Pf1N1B4_4633 | 0.61 | +0.5 | |
| 5,110,223 | - | Pf1N1B4_4633 | 0.61 | +0.2 | |
| 5,110,227 | - | Pf1N1B4_4633 | 0.62 | -0.8 | |
| 5,110,699 | + | -2.0 | |||
| 5,110,700 | - | +0.5 | |||
| 5,110,714 | + | -1.3 | |||
| 5,110,715 | - | +2.5 | |||
| 5,110,764 | - | -0.5 | |||
| 5,110,872 | + | +0.5 | |||
| 5,110,957 | - | -0.4 | |||
| 5,111,079 | + | -1.7 |
Or see this region's nucleotide sequence