Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3621

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
4,027,643	+		Pf1N1B4_3619	0.83	+0.5
4,027,643	+		Pf1N1B4_3619	0.83	+0.6
4,027,643	+		Pf1N1B4_3619	0.83	+1.2
4,027,643	+		Pf1N1B4_3619	0.83	-0.3
4,027,643	+		Pf1N1B4_3619	0.83	+0.3
4,027,643	+		Pf1N1B4_3619	0.83	-0.7
4,027,643	+		Pf1N1B4_3619	0.83	+0.4
4,027,643	+		Pf1N1B4_3619	0.83	+2.1
4,027,643	+		Pf1N1B4_3619	0.83	-2.1
4,027,644	-		Pf1N1B4_3619	0.84	-1.4
4,027,644	-				-1.1
4,027,644	-		Pf1N1B4_3619	0.84	+0.4
4,027,646	-		Pf1N1B4_3619	0.84	+1.7
4,027,646	-		Pf1N1B4_3619	0.84	-0.3
4,027,658	+		Pf1N1B4_3619	0.89	+0.0
4,027,666	+				-0.1
4,027,666	+				-1.9
4,027,666	+				-0.1
4,027,829	+		Pf1N1B4_3620	0.18	-0.5
4,027,830	-		Pf1N1B4_3620	0.18	+0.9
4,028,233	-				+1.5
4,028,448	+				+2.2
4,028,449	-				-0.1
4,028,581	+				+0.3
4,028,581	+				+1.2
4,028,581	+				-2.4
4,028,582	-				-0.1
4,028,582	-				+1.3
4,028,582	-				-0.5
4,029,058	+		Pf1N1B4_3621	0.51	+0.1
4,029,058	+		Pf1N1B4_3621	0.51	-0.1
4,029,059	-		Pf1N1B4_3621	0.51	-1.7
4,029,059	-		Pf1N1B4_3621	0.51	-0.1
4,029,059	-		Pf1N1B4_3621	0.51	-1.9
4,029,187	+		Pf1N1B4_3621	0.62	-0.8
4,029,187	+		Pf1N1B4_3621	0.62	-0.4
4,029,187	+		Pf1N1B4_3621	0.62	+0.5
4,029,297	-		Pf1N1B4_3621	0.72	-1.4
4,029,314	+		Pf1N1B4_3621	0.73	-0.7
4,029,315	-		Pf1N1B4_3621	0.74	-1.1
4,029,315	-				-0.1
4,029,404	-				+0.5
4,029,446	+		Pf1N1B4_3621	0.85	+1.2
4,029,446	+		Pf1N1B4_3621	0.85	-1.4
4,029,446	+		Pf1N1B4_3621	0.85	-1.9
4,029,446	+		Pf1N1B4_3621	0.85	-0.5
4,029,446	+		Pf1N1B4_3621	0.85	-0.4
4,029,449	+		Pf1N1B4_3621	0.85	-0.1
4,029,449	+		Pf1N1B4_3621	0.85	+0.1
4,029,488	+		Pf1N1B4_3621	0.89	-0.7
4,029,488	+		Pf1N1B4_3621	0.89	-0.7
4,029,515	+				-0.4
4,029,515	+				+0.9
4,029,515	+				-0.2
4,029,516	-				+0.0
4,029,522	-				+1.2
4,029,522	-				-1.4
4,029,661	+				+0.0
4,029,662	-				-0.2
4,029,682	+				-0.4
4,029,748	-				-1.7
4,029,748	-				-0.3
4,029,748	-				-0.9
4,029,748	-				+1.4
4,029,770	-				+0.1
4,029,770	-				-0.7
4,030,040	+				-0.1
4,030,040	+				-0.1
4,030,040	+				-0.1
4,030,041	-				+0.9
4,030,041	-				+1.9
4,030,041	-				+0.9
4,030,057	+				-0.7
4,030,057	-				+0.0
4,030,234	+		Pf1N1B4_3622	0.17	-0.3
4,030,234	+		Pf1N1B4_3622	0.17	+1.7
4,030,234	+		Pf1N1B4_3622	0.17	-1.0
4,030,234	+		Pf1N1B4_3622	0.17	+0.2
4,030,234	+				-0.7
4,030,234	+		Pf1N1B4_3622	0.17	+1.3
4,030,234	+				+0.6
4,030,234	+		Pf1N1B4_3622	0.17	+0.8
4,030,234	+		Pf1N1B4_3622	0.17	+0.1
4,030,234	+		Pf1N1B4_3622	0.17	-0.3
4,030,234	+		Pf1N1B4_3622	0.17	-0.1
4,030,234	+		Pf1N1B4_3622	0.17	-2.4
4,030,235	-		Pf1N1B4_3622	0.17	+0.3
4,030,235	-				-0.1
4,030,235	-		Pf1N1B4_3622	0.17	-0.9
4,030,287	-		Pf1N1B4_3622	0.20	-2.1
4,030,450	+		Pf1N1B4_3622	0.27	+0.3
4,030,548	+		Pf1N1B4_3622	0.32	+0.9
4,030,592	-		Pf1N1B4_3622	0.34	+0.6