Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3296

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
3,682,405	+		Pf1N1B4_3295	0.75	+0.6
3,682,405	+		Pf1N1B4_3295	0.75	+0.3
3,682,406	-		Pf1N1B4_3295	0.75	+0.3
3,682,406	-		Pf1N1B4_3295	0.75	-0.0
3,682,422	+		Pf1N1B4_3295	0.76	-0.6
3,682,432	+		Pf1N1B4_3295	0.77	+1.2
3,682,433	-		Pf1N1B4_3295	0.77	-2.0
3,682,510	+		Pf1N1B4_3295	0.82	-1.3
3,682,561	-		Pf1N1B4_3295	0.85	+0.5
3,682,561	-		Pf1N1B4_3295	0.85	-1.3
3,682,606	+		Pf1N1B4_3295	0.88	-0.9
3,682,607	-		Pf1N1B4_3295	0.88	+1.7
3,682,707	+				-1.0
3,682,707	+				+0.0
3,682,707	+				+0.0
3,682,707	+				+0.0
3,682,867	-				+1.4
3,682,879	-				+0.2
3,682,972	-				-1.3
3,683,078	-				-0.6
3,683,176	-		Pf1N1B4_5219	0.69	-0.8
3,683,185	-		Pf1N1B4_5219	0.82	-1.6
3,683,186	+		Pf1N1B4_5219	0.83	-1.1
3,683,186	+		Pf1N1B4_5219	0.83	+0.4
3,683,187	-		Pf1N1B4_5219	0.85	+1.0
3,683,187	-		Pf1N1B4_5219	0.85	+1.8
3,683,187	-		Pf1N1B4_5219	0.85	-0.8
3,683,187	-		Pf1N1B4_5219	0.85	-1.0
3,683,187	-				+0.0
3,683,187	-				+2.0
3,683,265	+				+0.2
3,683,265	+				+0.6
3,683,326	+				-1.8
3,683,411	-				+0.9
3,683,411	-				+0.8
3,683,411	-				-0.6
3,683,590	+				-1.0
3,683,590	+		Pf1N1B4_3296	0.24	-0.5
3,683,590	+		Pf1N1B4_3296	0.24	-1.6
3,683,591	-		Pf1N1B4_3296	0.24	-1.6
3,683,591	-		Pf1N1B4_3296	0.24	+1.0
3,683,653	+		Pf1N1B4_3296	0.31	-0.6
3,683,740	+		Pf1N1B4_3296	0.41	+0.4
3,683,740	+		Pf1N1B4_3296	0.41	-0.6
3,683,831	-				+0.6
3,683,851	+		Pf1N1B4_3296	0.53	-0.5
3,684,088	+		Pf1N1B4_3296	0.80	-1.3
3,684,173	+		Pf1N1B4_3296	0.90	-0.8
3,684,173	+		Pf1N1B4_3296	0.90	-0.2
3,684,173	+		Pf1N1B4_3296	0.90	+0.2
3,684,214	+				+2.4
3,684,234	+				-1.0
3,684,234	+				+0.9
3,684,234	+				+0.6
3,684,235	-				+0.6
3,684,235	-				+0.4
3,684,235	-				-0.5
3,684,235	-				+0.4
3,684,235	-				+0.3
3,684,235	-				+0.9
3,684,236	+				+0.3
3,684,236	+				+0.7
3,684,268	+				-2.0
3,684,269	-				+0.4
3,684,326	+				+0.1
3,684,326	+				+0.2
3,684,327	-				+0.7
3,684,332	+				-0.8
3,684,333	-				-0.6
3,684,333	-				-0.3
3,684,333	-				-2.3
3,684,391	+				+0.7
3,684,391	+				-1.0
3,684,391	+				+2.0
3,684,392	-				+0.6
3,684,392	-				-1.1
3,684,392	-				+0.5
3,684,393	+				-1.6
3,684,393	+				-1.3
3,684,393	+				+0.0
3,684,394	-				-1.0
3,684,394	-				+0.0
3,684,455	+				-1.2
3,684,455	+				+1.4
3,684,455	+				-0.2
3,684,455	+				+0.0
3,684,461	-				-0.2
3,684,533	-				+0.0
3,684,579	+				+2.0
3,684,580	-				+0.2
3,684,677	+		Pf1N1B4_3297	0.14	+1.2
3,684,713	-		Pf1N1B4_3297	0.19	+0.3
3,684,873	+		Pf1N1B4_3297	0.43	-1.4
3,684,873	+		Pf1N1B4_3297	0.43	+1.9
3,684,873	+		Pf1N1B4_3297	0.43	-0.8
3,684,873	+		Pf1N1B4_3297	0.43	+0.3
3,684,873	+		Pf1N1B4_3297	0.43	+0.0
3,684,874	-		Pf1N1B4_3297	0.43	+1.3
3,684,874	-		Pf1N1B4_3297	0.43	-0.1
3,684,874	-		Pf1N1B4_3297	0.43	+2.0
3,684,876	+		Pf1N1B4_3297	0.43	-2.1
3,684,876	+		Pf1N1B4_3297	0.43	-2.0
3,684,877	-				-0.3
3,684,877	-		Pf1N1B4_3297	0.43	+0.4
3,684,877	-		Pf1N1B4_3297	0.43	+0.8
3,684,877	-		Pf1N1B4_3297	0.43	+0.0
3,685,217	+				+0.5
3,685,217	+				-0.1
3,685,217	+				+0.5
3,685,217	+				+1.0
3,685,226	-				-1.3
3,685,226	-				-0.6