Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3017

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
3,391,478	+				-0.3
3,391,478	+				-2.3
3,391,478	+				+0.3
3,391,478	+				+1.6
3,391,478	+				+0.6
3,391,478	+				+1.0
3,391,478	+				-0.4
3,391,478	+				-1.2
3,391,478	+				+0.1
3,391,478	+				+1.1
3,391,478	+				+1.1
3,391,478	+				+0.6
3,391,478	+				-0.2
3,391,479	-				+1.1
3,391,479	-				+0.8
3,391,499	+				-0.3
3,391,499	+				-2.3
3,391,500	-				+0.1
3,391,500	-				+1.6
3,391,500	-				-0.7
3,391,558	+				+0.0
3,391,558	+				-0.3
3,391,558	+				+2.5
3,391,559	-				-0.9
3,391,559	-				+0.9
3,391,559	-				-0.2
3,391,559	-				+0.1
3,391,559	-				-1.2
3,391,580	-				+2.1
3,391,584	+				+0.3
3,391,661	-				-0.2
3,391,717	+				+0.1
3,391,717	+				+0.4
3,391,717	+				-0.4
3,391,773	+				+0.8
3,391,773	+				-2.3
3,391,774	-				+0.1
3,391,774	-				+0.0
3,391,774	-				-0.9
3,391,774	-				-0.1
3,391,774	-				-0.9
3,391,777	+				+0.4
3,391,778	-				+2.1
3,391,778	-				+0.6
3,391,778	-				+0.1
3,391,841	+				+0.4
3,391,841	+				+1.0
3,391,842	-				-0.9
3,391,842	-				-1.1
3,391,842	-				+0.4
3,391,878	-				-0.2
3,391,878	-				-0.1
3,391,903	+				-1.7
3,391,904	-				-0.0
3,391,904	-				-0.4
3,391,911	+				+0.1
3,391,911	+				+1.9
3,391,911	+				+1.1
3,391,911	+				-2.2
3,391,911	+				-0.9
3,391,911	+				+0.9
3,391,911	+				+0.7
3,391,911	+				+0.8
3,391,912	-				-1.2
3,391,912	-				+0.6
3,391,912	-				+1.7
3,391,912	-				-0.8
3,391,929	+		Pf1N1B4_3016	0.15	-1.2
3,392,230	+				-0.4
3,392,230	+				+0.8
3,392,266	-				+1.0
3,392,276	+				+0.6
3,392,286	+				-1.0
3,392,291	-				-1.3
3,392,473	+		Pf1N1B4_3017	0.13	-0.9
3,392,514	+		Pf1N1B4_3017	0.17	-1.2
3,392,514	+		Pf1N1B4_3017	0.17	-0.8
3,392,515	-		Pf1N1B4_3017	0.17	-0.9
3,392,543	+		Pf1N1B4_3017	0.20	+0.1
3,392,543	+		Pf1N1B4_3017	0.20	-0.4
3,392,544	-		Pf1N1B4_3017	0.21	-0.2
3,392,544	-		Pf1N1B4_3017	0.21	-0.7
3,392,567	+		Pf1N1B4_3017	0.23	-0.2
3,392,592	+		Pf1N1B4_3017	0.26	-0.7
3,392,593	-		Pf1N1B4_3017	0.26	-1.4
3,392,593	-		Pf1N1B4_3017	0.26	-1.1
3,392,593	-		Pf1N1B4_3017	0.26	-1.0
3,393,032	+		Pf1N1B4_3017	0.73	+0.4
3,393,153	+		Pf1N1B4_3017	0.86	-0.4
3,393,153	+		Pf1N1B4_3017	0.86	+1.1
3,393,154	-		Pf1N1B4_3017	0.86	-0.7
3,393,154	-		Pf1N1B4_3017	0.86	+0.1
3,393,261	+				-1.2
3,393,261	+				+0.6
3,393,262	-				+0.6
3,393,262	-				-0.3
3,393,262	-				+1.7
3,393,281	+				-0.3
3,393,281	+				+0.0
3,393,307	-				+0.1
3,393,465	+		Pf1N1B4_3018	0.17	+0.3
3,393,466	-		Pf1N1B4_3018	0.17	-0.6
3,393,713	+		Pf1N1B4_3018	0.38	+0.1
3,393,714	-		Pf1N1B4_3018	0.38	+1.0
3,393,714	-		Pf1N1B4_3018	0.38	+1.3
3,393,714	-		Pf1N1B4_3018	0.38	-0.1
3,393,849	+		Pf1N1B4_3018	0.49	+0.7
3,393,849	+		Pf1N1B4_3018	0.49	-0.4
3,393,850	-		Pf1N1B4_3018	0.49	-0.4
3,393,866	+		Pf1N1B4_3018	0.51	+0.3
3,393,867	-		Pf1N1B4_3018	0.51	-0.4
3,394,002	+		Pf1N1B4_3018	0.62	-1.9
3,394,002	+		Pf1N1B4_3018	0.62	-1.2
3,394,002	+		Pf1N1B4_3018	0.62	-0.2
3,394,002	+		Pf1N1B4_3018	0.62	+0.3
3,394,003	-		Pf1N1B4_3018	0.62	-0.1
3,394,003	-		Pf1N1B4_3018	0.62	+1.6
3,394,003	-		Pf1N1B4_3018	0.62	-0.1
3,394,003	-		Pf1N1B4_3018	0.62	-1.2
3,394,003	-				-1.2