Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1854

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
2,125,036	+		Pf1N1B4_1853	0.13	-0.7
2,125,073	-		Pf1N1B4_1853	0.16	-0.1
2,125,158	-		Pf1N1B4_1853	0.24	+0.8
2,125,158	-		Pf1N1B4_1853	0.24	+1.0
2,125,158	-		Pf1N1B4_1853	0.24	+0.5
2,125,158	-		Pf1N1B4_1853	0.24	+0.7
2,125,217	+		Pf1N1B4_1853	0.30	-1.3
2,125,218	-		Pf1N1B4_1853	0.30	-0.5
2,125,218	-		Pf1N1B4_1853	0.30	-1.0
2,125,218	-		Pf1N1B4_1853	0.30	+0.0
2,125,223	+		Pf1N1B4_1853	0.30	-0.8
2,125,223	+		Pf1N1B4_1853	0.30	-2.1
2,125,223	+		Pf1N1B4_1853	0.30	+0.7
2,125,224	-		Pf1N1B4_1853	0.30	+2.5
2,125,224	-		Pf1N1B4_1853	0.30	+0.5
2,125,224	-		Pf1N1B4_1853	0.30	+0.2
2,125,224	-		Pf1N1B4_1853	0.30	+1.2
2,125,224	-		Pf1N1B4_1853	0.30	+1.9
2,125,224	-		Pf1N1B4_1853	0.30	+0.7
2,125,224	-		Pf1N1B4_1853	0.30	-0.6
2,125,224	-		Pf1N1B4_1853	0.30	+0.2
2,125,224	-		Pf1N1B4_1853	0.30	+0.5
2,125,224	-		Pf1N1B4_1853	0.30	-0.3
2,125,224	-		Pf1N1B4_1853	0.30	-0.4
2,125,307	+		Pf1N1B4_1853	0.38	+1.5
2,125,307	+		Pf1N1B4_1853	0.38	-0.5
2,125,308	-		Pf1N1B4_1853	0.38	+0.5
2,125,308	-		Pf1N1B4_1853	0.38	+0.7
2,125,308	-		Pf1N1B4_1853	0.38	+1.3
2,125,308	-		Pf1N1B4_1853	0.38	+1.1
2,125,308	-		Pf1N1B4_1853	0.38	+2.1
2,125,308	-		Pf1N1B4_1853	0.38	+0.1
2,125,308	-		Pf1N1B4_1853	0.38	+0.2
2,125,481	+		Pf1N1B4_1853	0.55	+0.8
2,125,481	+		Pf1N1B4_1853	0.55	+0.3
2,125,481	+		Pf1N1B4_1853	0.55	-2.0
2,125,481	+		Pf1N1B4_1853	0.55	+0.5
2,125,482	-		Pf1N1B4_1853	0.55	+0.7
2,125,482	-		Pf1N1B4_1853	0.55	+1.5
2,125,482	-		Pf1N1B4_1853	0.55	+0.0
2,125,482	-		Pf1N1B4_1853	0.55	+0.4
2,125,482	-		Pf1N1B4_1853	0.55	-0.0
2,125,667	+		Pf1N1B4_1853	0.73	+0.2
2,125,667	+		Pf1N1B4_1853	0.73	+0.9
2,125,667	+		Pf1N1B4_1853	0.73	-1.0
2,125,668	-		Pf1N1B4_1853	0.73	+0.2
2,125,865	+				+0.2
2,125,865	+				-0.1
2,125,865	+				+0.5
2,125,866	-				-1.1
2,125,866	-				+0.7
2,125,866	-				+1.0
2,125,874	-				-0.1
2,125,913	-				-0.1
2,125,959	+				-0.5
2,125,959	+				-0.7
2,125,960	-				-3.1
2,125,960	-				+1.0
2,125,960	-				-0.9
2,126,044	+				-0.0
2,126,148	+				-1.1
2,126,148	+				-1.1
2,126,148	+				+0.9
2,126,149	-				+1.5
2,126,149	-				-0.3
2,126,149	-				+0.2
2,126,149	-				-0.3
2,126,149	-				-0.1
2,126,149	-				+0.7
2,126,149	-				-1.8
2,126,317	+		Pf1N1B4_1854	0.18	+1.0
2,126,318	-		Pf1N1B4_1854	0.18	+0.7
2,126,318	-		Pf1N1B4_1854	0.18	+0.8
2,126,318	-		Pf1N1B4_1854	0.18	+0.3
2,126,422	+		Pf1N1B4_1854	0.24	+2.2
2,126,422	+		Pf1N1B4_1854	0.24	-1.5
2,126,429	-		Pf1N1B4_1854	0.25	+0.2
2,126,430	-		Pf1N1B4_1854	0.25	-2.1
2,126,478	+		Pf1N1B4_1854	0.28	+1.1
2,126,479	-		Pf1N1B4_1854	0.28	+0.2
2,126,499	+		Pf1N1B4_1854	0.29	+1.0
2,126,499	+		Pf1N1B4_1854	0.29	+0.3
2,126,500	-		Pf1N1B4_1854	0.29	+0.2
2,126,500	-		Pf1N1B4_1854	0.29	+0.4
2,126,500	-		Pf1N1B4_1854	0.29	+1.5
2,126,817	+		Pf1N1B4_1854	0.49	-0.1
2,126,817	+		Pf1N1B4_1854	0.49	+1.5
2,126,817	+		Pf1N1B4_1854	0.49	-0.9
2,126,817	+		Pf1N1B4_1854	0.49	+1.1
2,126,817	+		Pf1N1B4_1854	0.49	+0.5
2,126,817	+				+0.9
2,126,817	+		Pf1N1B4_1854	0.49	-0.5
2,126,817	+		Pf1N1B4_1854	0.49	-1.3
2,126,817	+		Pf1N1B4_1854	0.49	-0.5
2,126,817	+		Pf1N1B4_1854	0.49	+2.1
2,126,817	+		Pf1N1B4_1854	0.49	+1.1
2,126,817	+		Pf1N1B4_1854	0.49	-0.4
2,126,817	+		Pf1N1B4_1854	0.49	+0.7
2,126,817	+		Pf1N1B4_1854	0.49	+0.5
2,126,818	-		Pf1N1B4_1854	0.49	-1.7
2,126,818	-		Pf1N1B4_1854	0.49	-2.0
2,126,818	-		Pf1N1B4_1854	0.49	-0.8
2,126,818	-		Pf1N1B4_1854	0.49	+2.1
2,126,818	-		Pf1N1B4_1854	0.49	+0.3
2,126,818	-		Pf1N1B4_1854	0.49	+0.2
2,126,818	-		Pf1N1B4_1854	0.49	-0.2
2,126,818	-		Pf1N1B4_1854	0.49	-0.7
2,126,818	-		Pf1N1B4_1854	0.49	-0.5
2,126,818	-		Pf1N1B4_1854	0.49	-0.5
2,126,818	-		Pf1N1B4_1854	0.49	+1.0
2,126,818	-		Pf1N1B4_1854	0.49	-0.3
2,126,818	-		Pf1N1B4_1854	0.49	-0.5
2,126,818	-		Pf1N1B4_1854	0.49	+1.7
2,126,818	-		Pf1N1B4_1854	0.49	+0.8
2,126,892	+		Pf1N1B4_1854	0.54	-0.2
2,126,907	+		Pf1N1B4_1854	0.55	+1.0
2,126,907	+		Pf1N1B4_1854	0.55	-1.5
2,126,908	-		Pf1N1B4_1854	0.55	+1.8
2,126,908	-		Pf1N1B4_1854	0.55	+1.0
2,126,908	-		Pf1N1B4_1854	0.55	+1.2
2,126,921	+		Pf1N1B4_1854	0.56	-0.4
2,126,922	-		Pf1N1B4_1854	0.56	-1.2
2,126,922	-		Pf1N1B4_1854	0.56	+0.2
2,127,003	+		Pf1N1B4_1854	0.61	+0.8
2,127,003	+		Pf1N1B4_1854	0.61	-1.8
2,127,003	+		Pf1N1B4_1854	0.61	-1.3
2,127,003	+		Pf1N1B4_1854	0.61	-0.6
2,127,003	+		Pf1N1B4_1854	0.61	-0.1
2,127,003	+				+0.7
2,127,004	-		Pf1N1B4_1854	0.61	-0.5
2,127,062	+		Pf1N1B4_1854	0.65	-0.2
2,127,062	+		Pf1N1B4_1854	0.65	-0.1
2,127,062	+		Pf1N1B4_1854	0.65	-0.0
2,127,062	+		Pf1N1B4_1854	0.65	+0.2
2,127,062	+		Pf1N1B4_1854	0.65	+0.9
2,127,062	+		Pf1N1B4_1854	0.65	+1.8
2,127,062	+		Pf1N1B4_1854	0.65	+0.4
2,127,063	-		Pf1N1B4_1854	0.65	+0.2
2,127,063	-		Pf1N1B4_1854	0.65	-0.8
2,127,063	-		Pf1N1B4_1854	0.65	+0.5
2,127,063	-		Pf1N1B4_1854	0.65	-0.8
2,127,063	-		Pf1N1B4_1854	0.65	+0.9
2,127,063	-		Pf1N1B4_1854	0.65	+1.3
2,127,063	-		Pf1N1B4_1854	0.65	-0.7
2,127,063	-		Pf1N1B4_1854	0.65	-0.5
2,127,183	+		Pf1N1B4_1854	0.72	-0.8
2,127,195	+		Pf1N1B4_1854	0.73	+0.7
2,127,195	+		Pf1N1B4_1854	0.73	-0.1
2,127,195	+		Pf1N1B4_1854	0.73	+1.3
2,127,195	+		Pf1N1B4_1854	0.73	-0.3
2,127,195	+		Pf1N1B4_1854	0.73	+1.2
2,127,195	+		Pf1N1B4_1854	0.73	-0.3
2,127,195	+		Pf1N1B4_1854	0.73	+0.4
2,127,195	+		Pf1N1B4_1854	0.73	+1.5
2,127,195	+		Pf1N1B4_1854	0.73	-2.8
2,127,195	+		Pf1N1B4_1854	0.73	-1.5
2,127,195	+		Pf1N1B4_1854	0.73	-0.3
2,127,195	+		Pf1N1B4_1854	0.73	-0.5
2,127,195	+		Pf1N1B4_1854	0.73	+0.9
2,127,196	-		Pf1N1B4_1854	0.73	+1.4
2,127,196	-		Pf1N1B4_1854	0.73	-1.1
2,127,196	-		Pf1N1B4_1854	0.73	-0.2
2,127,196	-		Pf1N1B4_1854	0.73	+0.2
2,127,196	-		Pf1N1B4_1854	0.73	-0.1
2,127,196	-		Pf1N1B4_1854	0.73	-0.2
2,127,196	-		Pf1N1B4_1854	0.73	-0.3
2,127,196	-		Pf1N1B4_1854	0.73	-1.6
2,127,196	-		Pf1N1B4_1854	0.73	+0.9
2,127,196	-		Pf1N1B4_1854	0.73	-0.3
2,127,219	+		Pf1N1B4_1854	0.74	+0.3
2,127,220	-		Pf1N1B4_1854	0.74	+0.2
2,127,220	-		Pf1N1B4_1854	0.74	+1.5
2,127,264	+		Pf1N1B4_1854	0.77	-1.3
2,127,264	+		Pf1N1B4_1854	0.77	-1.5
2,127,265	-		Pf1N1B4_1854	0.77	+0.5
2,127,267	+		Pf1N1B4_1854	0.77	+0.0
2,127,267	+		Pf1N1B4_1854	0.77	+3.1
2,127,268	-		Pf1N1B4_1854	0.77	-1.1
2,127,268	-		Pf1N1B4_1854	0.77	+0.8
2,127,297	+		Pf1N1B4_1854	0.79	+0.2
2,127,297	+		Pf1N1B4_1854	0.79	-2.4
2,127,297	+		Pf1N1B4_1854	0.79	+0.9
2,127,297	+				-1.5
2,127,297	+		Pf1N1B4_1854	0.79	+0.7
2,127,297	+		Pf1N1B4_1854	0.79	+0.8
2,127,297	+		Pf1N1B4_1854	0.79	+1.8
2,127,298	-		Pf1N1B4_1854	0.79	-0.7
2,127,298	-		Pf1N1B4_1854	0.79	+1.5
2,127,298	-		Pf1N1B4_1854	0.79	+0.3
2,127,298	-		Pf1N1B4_1854	0.79	+0.1
2,127,411	+		Pf1N1B4_1854	0.86	+0.6
2,127,411	+		Pf1N1B4_1854	0.86	+0.5
2,127,411	+		Pf1N1B4_1854	0.86	-1.3
2,127,411	+		Pf1N1B4_1854	0.86	-0.3
2,127,412	-		Pf1N1B4_1854	0.87	+0.2
2,127,412	-		Pf1N1B4_1854	0.87	+1.5
2,127,642	+		Pf1N1B4_1855	0.13	-2.1
2,127,642	+		Pf1N1B4_1855	0.13	+0.6
2,127,642	+		Pf1N1B4_1855	0.13	-0.8
2,127,642	+		Pf1N1B4_1855	0.13	-0.6
2,127,642	+		Pf1N1B4_1855	0.13	+0.9
2,127,642	+		Pf1N1B4_1855	0.13	-0.8
2,127,642	+		Pf1N1B4_1855	0.13	+1.3
2,127,700	+		Pf1N1B4_1855	0.55	+0.8
2,127,700	+		Pf1N1B4_1855	0.55	+0.3
2,127,700	+		Pf1N1B4_1855	0.55	-1.1
2,127,700	+		Pf1N1B4_1855	0.55	-1.1
2,127,700	+		Pf1N1B4_1855	0.55	+0.1
2,127,700	+		Pf1N1B4_1855	0.55	+0.6
2,127,701	-		Pf1N1B4_1855	0.55	-0.1
2,127,701	-		Pf1N1B4_1855	0.55	-0.4
2,127,849	+		Pf1N1B4_1856	0.17	-1.0
2,127,849	+		Pf1N1B4_1856	0.17	+0.7
2,127,849	+		Pf1N1B4_1856	0.17	+1.2
2,127,849	+		Pf1N1B4_1856	0.17	-0.7
2,127,850	-		Pf1N1B4_1856	0.17	-0.3
2,127,850	-		Pf1N1B4_1856	0.17	+2.5
2,127,850	-		Pf1N1B4_1856	0.17	+2.1
2,127,850	-		Pf1N1B4_1856	0.17	-0.8
2,127,850	-		Pf1N1B4_1856	0.17	+0.9
2,127,900	+		Pf1N1B4_1856	0.26	-0.3
2,127,900	+		Pf1N1B4_1856	0.26	-1.3
2,127,900	+		Pf1N1B4_1856	0.26	-0.6
2,127,901	-		Pf1N1B4_1856	0.26	-0.5
2,127,987	+				+0.5
2,127,987	+		Pf1N1B4_1856	0.41	-0.1
2,128,119	+		Pf1N1B4_1856	0.65	+2.6
2,128,119	+		Pf1N1B4_1856	0.65	-0.7
2,128,120	-		Pf1N1B4_1856	0.65	+0.9
2,128,248	+		Pf1N1B4_1856	0.88	-1.4
2,128,248	+		Pf1N1B4_1856	0.88	+0.1
2,128,318	+				+0.2
2,128,344	+				+0.9
2,128,344	+				+1.8
2,128,344	+				+0.2
2,128,344	+				-1.5
2,128,344	+				+0.5
2,128,344	+				-0.3
2,128,344	+				-1.3
2,128,344	+				-0.4
2,128,344	+				+1.4
2,128,344	+				-1.7
2,128,344	+				+1.5
2,128,344	+				-0.3
2,128,345	-				-2.0
2,128,345	-				-0.3
2,128,345	-				+0.0
2,128,345	-				-1.1
2,128,345	-				-0.5
2,128,345	-				-2.2
2,128,345	-				+0.1
2,128,345	-				-0.1
2,128,365	+				-0.8
2,128,365	+				+0.7
2,128,365	+				-0.4
2,128,365	+				-0.8
2,128,366	-				+1.0
2,128,366	-				-0.3
2,128,366	-				-2.5
2,128,366	-				+0.8
2,128,366	-				+0.1
2,128,366	-				+0.2
2,128,366	-				-0.5
2,128,368	+				-1.2
2,128,368	+				+1.3
2,128,368	+				-1.1
2,128,368	+				+1.7
2,128,368	+				-0.7
2,128,368	+				+0.2
2,128,368	+				-0.5
2,128,369	-				+0.3
2,128,369	-				+0.4
2,128,369	-				+0.8
2,128,369	-				+1.9
2,128,369	-				+0.2
2,128,369	-				-0.3
2,128,521	+		Pf1N1B4_1857	0.20	-1.7
2,128,521	+		Pf1N1B4_1857	0.20	-0.7
2,128,521	+		Pf1N1B4_1857	0.20	+0.5
2,128,521	+		Pf1N1B4_1857	0.20	+0.3
2,128,521	+		Pf1N1B4_1857	0.20	-0.1
2,128,521	+		Pf1N1B4_1857	0.20	+0.9
2,128,521	+		Pf1N1B4_1857	0.20	-1.1
2,128,521	+		Pf1N1B4_1857	0.20	+0.1
2,128,521	+		Pf1N1B4_1857	0.20	+0.4
2,128,521	+		Pf1N1B4_1857	0.20	+0.5
2,128,521	+		Pf1N1B4_1857	0.20	-0.9
2,128,522	-		Pf1N1B4_1857	0.20	-0.2
2,128,522	-		Pf1N1B4_1857	0.20	-0.5
2,128,522	-				+1.5
2,128,575	+		Pf1N1B4_1857	0.26	-0.5
2,128,575	+		Pf1N1B4_1857	0.26	+0.9
2,128,575	+		Pf1N1B4_1857	0.26	-0.1
2,128,575	+		Pf1N1B4_1857	0.26	-0.1
2,128,575	+		Pf1N1B4_1857	0.26	+0.1
2,128,575	+		Pf1N1B4_1857	0.26	-1.2
2,128,576	-		Pf1N1B4_1857	0.26	+0.7
2,128,576	-		Pf1N1B4_1857	0.26	-1.3
2,128,576	-		Pf1N1B4_1857	0.26	+0.2