Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1734

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
1,981,743	+		Pf1N1B4_1733	0.43	+1.4
1,981,743	+		Pf1N1B4_1733	0.43	-0.3
1,981,744	-		Pf1N1B4_1733	0.43	+0.1
1,981,744	-		Pf1N1B4_1733	0.43	-0.4
1,981,744	-		Pf1N1B4_1733	0.43	+1.4
1,981,744	-		Pf1N1B4_1733	0.43	+0.7
1,981,761	+		Pf1N1B4_1733	0.45	-0.3
1,981,762	-		Pf1N1B4_1733	0.45	-2.0
1,981,762	-		Pf1N1B4_1733	0.45	+0.0
1,981,762	-		Pf1N1B4_1733	0.45	+0.9
1,981,762	-		Pf1N1B4_1733	0.45	+0.2
1,981,762	-		Pf1N1B4_1733	0.45	-0.1
1,981,762	-		Pf1N1B4_1733	0.45	-0.4
1,981,762	-		Pf1N1B4_1733	0.45	-0.4
1,981,823	-		Pf1N1B4_1733	0.49	-0.9
1,981,823	-		Pf1N1B4_1733	0.49	-1.1
1,982,015	+		Pf1N1B4_1733	0.64	+1.4
1,982,053	+		Pf1N1B4_1733	0.67	-1.3
1,982,053	+		Pf1N1B4_1733	0.67	+0.4
1,982,210	-		Pf1N1B4_1733	0.80	+0.8
1,982,210	-		Pf1N1B4_1733	0.80	+0.1
1,982,210	-		Pf1N1B4_1733	0.80	-1.9
1,982,210	-		Pf1N1B4_1733	0.80	-0.7
1,982,218	+		Pf1N1B4_1733	0.80	+0.4
1,982,219	-		Pf1N1B4_1733	0.80	+1.1
1,982,468	+				+1.7
1,982,468	+				+0.4
1,982,468	+				-0.6
1,982,468	+				+1.4
1,982,468	+				-0.7
1,982,468	+				-0.2
1,982,469	-				+0.6
1,982,469	-				+1.4
1,982,469	-				-0.4
1,982,469	-				+0.1
1,982,469	-				-1.7
1,982,469	-				+1.9
1,982,531	+				+0.3
1,982,532	-				+0.6
1,982,532	-				+2.4
1,982,532	-				+1.6
1,982,650	+				+3.4
1,982,650	+				+0.4
1,982,650	+				+0.0
1,982,650	+				+1.4
1,982,650	+				-0.6
1,982,650	+				+0.3
1,982,650	+				+2.8
1,982,651	-				+0.1
1,982,651	-				-1.1
1,982,651	-				-2.6
1,982,668	+				-0.1
1,982,669	-				-1.7
1,982,669	-				-0.3
1,982,669	-				-1.4
1,982,669	-				+1.0
1,982,683	+				+1.4
1,982,683	+				+0.4
1,982,698	+				-1.1
1,982,699	-				+0.0
1,982,699	-				+0.6
1,982,795	-		Pf1N1B4_1734	0.10	+0.3
1,982,842	+		Pf1N1B4_1734	0.13	-1.4
1,982,842	+		Pf1N1B4_1734	0.13	-0.1
1,982,842	+		Pf1N1B4_1734	0.13	+0.9
1,982,842	+		Pf1N1B4_1734	0.13	+0.9
1,982,842	+		Pf1N1B4_1734	0.13	+0.6
1,982,843	-		Pf1N1B4_1734	0.13	+2.2
1,982,843	-		Pf1N1B4_1734	0.13	-0.9
1,982,843	-		Pf1N1B4_1734	0.13	-1.1
1,982,843	-		Pf1N1B4_1734	0.13	+1.4
1,982,843	-		Pf1N1B4_1734	0.13	-2.7
1,982,843	-		Pf1N1B4_1734	0.13	-0.9
1,982,843	-		Pf1N1B4_1734	0.13	+1.4
1,982,843	-		Pf1N1B4_1734	0.13	-2.4
1,982,843	-		Pf1N1B4_1734	0.13	-1.4
1,982,843	-		Pf1N1B4_1734	0.13	-1.6
1,982,843	-		Pf1N1B4_1734	0.13	-1.6
1,982,843	-		Pf1N1B4_1734	0.13	+0.4
1,982,848	+		Pf1N1B4_1734	0.14	-0.9
1,982,848	+		Pf1N1B4_1734	0.14	+1.4
1,982,848	+		Pf1N1B4_1734	0.14	-2.0
1,982,848	+		Pf1N1B4_1734	0.14	-2.1
1,982,848	+		Pf1N1B4_1734	0.14	-1.1
1,982,848	+		Pf1N1B4_1734	0.14	+0.1
1,982,849	-		Pf1N1B4_1734	0.14	+0.8
1,982,849	-		Pf1N1B4_1734	0.14	+1.9
1,982,849	-		Pf1N1B4_1734	0.14	-0.4
1,983,187	+		Pf1N1B4_1734	0.37	+1.0
1,983,205	+		Pf1N1B4_1734	0.39	-0.1
1,983,206	-		Pf1N1B4_1734	0.39	-1.2
1,983,206	-		Pf1N1B4_1734	0.39	-0.6
1,983,206	-		Pf1N1B4_1734	0.39	-2.3
1,984,083	-				-0.6
1,984,083	-				-0.7
1,984,083	-				-0.3
1,984,132	+				-0.1
1,984,132	+				-0.3
1,984,132	+				-0.4
1,984,132	+				+0.3
1,984,132	+				+0.0
1,984,133	-				+0.7
1,984,140	+				-1.1
1,984,140	+				+0.4
1,984,140	+				+0.5
1,984,140	+				+0.1
1,984,140	+				-0.1
1,984,141	-				-0.1
1,984,155	+				-1.4
1,984,155	+				+0.1
1,984,155	+				+0.7
1,984,155	+				+0.1
1,984,155	+				+0.3
1,984,155	+				-0.7
1,984,155	+				-0.1
1,984,156	-				-0.1
1,984,156	-				+0.7
1,984,156	-				+1.2
1,984,196	+				-0.5
1,984,196	+				-1.2
1,984,196	+				-0.7
1,984,196	+				-0.6
1,984,196	+				-1.6
1,984,196	+				-1.6
1,984,196	+				+0.2
1,984,196	+				+1.1
1,984,201	-				-0.1
1,984,267	+				-1.4
1,984,267	+				-0.4
1,984,267	+				+0.0
1,984,267	+				-2.0
1,984,268	-				+2.0
1,984,282	+				-0.9
1,984,283	-				-1.7
1,984,516	+				-0.9
1,984,516	+				-0.4
1,984,516	+				-1.6
1,984,516	+				+2.2
1,984,516	+				+1.2
1,984,516	+				-0.3
1,984,516	+				+1.4
1,984,516	+				-1.3
1,984,516	+				+0.9
1,984,516	+				+0.2
1,984,516	+				-1.9
1,984,516	+				-0.6
1,984,516	+				+0.7
1,984,516	+				+0.4
1,984,517	-				-0.9
1,984,517	-				+0.4
1,984,517	-				+0.7
1,984,520	+				-1.1
1,984,520	+				-0.0
1,984,520	+				-0.5
1,984,520	+				+0.6
1,984,520	+				-0.4
1,984,520	+				+0.7
1,984,520	+				-0.1
1,984,520	+				+0.9
1,984,520	+				+0.3
1,984,520	+				+1.1
1,984,521	-				-0.1
1,984,569	-				-1.1
1,984,592	+				+0.6
1,984,593	-				-2.9
1,984,593	-				-0.3
1,984,593	-				-0.6
1,984,695	-				+0.2
1,984,707	-				+1.0
1,984,743	-				+0.4
1,984,743	-				-1.6
1,984,762	-				+0.6
1,984,790	-				+1.9