Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1234

Experiment: Tetracycline 0.0004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0004 mg/ml
1,399,070	+		Pf1N1B4_1232	0.77	-0.2
1,399,070	+		Pf1N1B4_1232	0.77	+0.3
1,399,071	-		Pf1N1B4_1232	0.77	+1.7
1,399,188	+		Pf1N1B4_1232	0.86	+0.7
1,399,188	+		Pf1N1B4_1232	0.86	-0.1
1,399,188	+		Pf1N1B4_1232	0.86	+0.9
1,399,189	-		Pf1N1B4_1232	0.86	-0.1
1,399,189	-		Pf1N1B4_1232	0.86	+1.9
1,399,189	-		Pf1N1B4_1232	0.86	+0.3
1,399,230	+		Pf1N1B4_1232	0.89	-0.5
1,399,231	-		Pf1N1B4_1232	0.89	-1.0
1,399,343	+				-0.0
1,399,343	+				+1.3
1,399,343	+				+1.3
1,399,343	+				-1.0
1,399,343	+				+2.1
1,399,344	-				+1.1
1,399,344	-				-0.9
1,399,344	-				+0.3
1,399,344	-				-0.8
1,399,344	-				-0.5
1,399,344	-				-0.8
1,399,359	-				-0.3
1,399,459	+		Pf1N1B4_1233	0.17	+0.3
1,399,459	+		Pf1N1B4_1233	0.17	-0.5
1,399,460	-		Pf1N1B4_1233	0.17	+0.8
1,399,460	-		Pf1N1B4_1233	0.17	-1.5
1,399,498	+		Pf1N1B4_1233	0.23	+1.3
1,399,499	-		Pf1N1B4_1233	0.24	-0.2
1,399,598	+		Pf1N1B4_1233	0.41	-1.7
1,399,598	+		Pf1N1B4_1233	0.41	+0.1
1,399,598	+		Pf1N1B4_1233	0.41	-0.6
1,399,599	-		Pf1N1B4_1233	0.41	-0.7
1,399,706	+		Pf1N1B4_1233	0.60	+0.4
1,399,706	+		Pf1N1B4_1233	0.60	+0.2
1,399,766	+		Pf1N1B4_1233	0.70	-1.0
1,399,766	+		Pf1N1B4_1233	0.70	-2.0
1,399,767	-		Pf1N1B4_1233	0.70	-1.0
1,400,013	+				-1.0
1,400,013	+				+0.2
1,400,199	+				+0.9
1,400,199	+				-0.3
1,400,199	+				-0.3
1,400,199	+				-0.0
1,400,200	-				+0.3
1,400,200	-				+0.3
1,400,200	-				-0.7
1,400,200	-				-0.8
1,400,286	-		Pf1N1B4_1234	0.11	+0.1
1,400,298	+		Pf1N1B4_1234	0.11	+0.5
1,400,298	+		Pf1N1B4_1234	0.11	-0.9
1,400,715	+		Pf1N1B4_1234	0.31	-0.6
1,400,807	+		Pf1N1B4_1234	0.36	+0.3
1,400,808	-		Pf1N1B4_1234	0.36	-1.5
1,400,835	-		Pf1N1B4_1234	0.37	-0.7
1,401,040	-		Pf1N1B4_1234	0.47	+0.8
1,401,209	+		Pf1N1B4_1234	0.55	+1.0
1,401,210	-		Pf1N1B4_1234	0.55	-0.7
1,401,210	-		Pf1N1B4_1234	0.55	-1.4
1,401,210	-		Pf1N1B4_1234	0.55	-2.0
1,401,210	-		Pf1N1B4_1234	0.55	-1.5
1,401,658	+		Pf1N1B4_1234	0.76	-1.3
1,401,697	-		Pf1N1B4_1234	0.78	-1.3
1,401,697	-		Pf1N1B4_1234	0.78	-1.9
1,402,172	-				+0.3
1,402,172	-				-0.7
1,402,269	-				+0.7
1,402,293	+				-0.7
1,402,311	-				+0.6
1,402,311	-				+0.6
1,402,311	-				-0.3
1,402,389	-				+1.3
1,402,389	-				+1.3
1,402,397	+				-0.0
1,402,398	-				+0.7
1,402,398	-				-0.6
1,402,452	-				+0.7
1,402,499	+				-1.7
1,402,499	+				-1.3
1,402,500	-				-0.5
1,402,602	-				+1.3
1,402,602	-		Pf1N1B4_1235	0.12	-0.6