Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01843

Experiment: PYE with Nickel (II) chloride 0.15 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nickel (II) chloride 0.15 mM
1,973,484	-		CCNA_01841	0.61	-1.3
1,973,494	-		CCNA_01841	0.62	-1.0
1,973,499	+		CCNA_01841	0.62	+1.0
1,973,499	+		CCNA_01841	0.62	+0.4
1,973,501	+		CCNA_01841	0.62	+1.7
1,973,507	-		CCNA_01841	0.63	-1.0
1,973,509	-		CCNA_01841	0.63	+1.9
1,973,517	-		CCNA_01841	0.63	+1.4
1,973,540	+		CCNA_01841	0.65	+0.2
1,973,553	-		CCNA_01841	0.66	-1.2
1,973,565	+		CCNA_01841	0.66	+0.5
1,973,565	+		CCNA_01841	0.66	-1.1
1,973,574	-		CCNA_01841	0.67	+0.2
1,973,595	+		CCNA_01841	0.68	+1.1
1,973,612	+		CCNA_01841	0.69	+0.2
1,973,651	+		CCNA_01841	0.72	+1.1
1,973,651	+		CCNA_01841	0.72	+0.4
1,973,664	+		CCNA_01841	0.72	+1.3
1,973,744	+		CCNA_01841	0.77	-0.2
1,973,749	+		CCNA_01841	0.78	-0.4
1,973,774	+		CCNA_01841	0.79	-1.2
1,973,789	+		CCNA_01841	0.80	-1.3
1,973,851	+		CCNA_01841	0.84	-0.6
1,973,868	+		CCNA_01841	0.85	+1.4
1,973,935	+		CCNA_01841	0.89	+1.8
1,973,941	+		CCNA_01841	0.90	+2.1
1,973,941	+		CCNA_01841	0.90	+0.6
1,973,943	-		CCNA_01841	0.90	+0.1
1,973,946	+		CCNA_01841	0.90	+2.1
1,973,959	-				-1.4
1,974,009	+				+0.2
1,974,017	-				+1.9
1,974,017	-				+0.0
1,974,017	-				-1.4
1,974,027	+				+0.1
1,974,076	+				-0.6
1,974,084	+				-0.4
1,974,125	+				+0.3
1,974,133	-				-0.5
1,974,216	-		CCNA_01842	0.32	+0.6
1,974,264	+		CCNA_01842	0.53	-0.5
1,974,310	+		CCNA_01842	0.73	-1.2
1,974,310	+		CCNA_01842	0.73	-0.4
1,974,310	+		CCNA_01842	0.73	+0.3
1,974,318	-		CCNA_01842	0.77	+0.4
1,974,328	-		CCNA_01842	0.81	-2.4
1,974,329	+		CCNA_01842	0.82	+0.2
1,974,432	+				-0.9
1,974,473	+				-1.8
1,974,474	+				+0.6
1,974,493	+				-0.1
1,974,519	-				+0.6
1,974,529	-				-1.4
1,974,537	-				-0.1
1,974,537	-				+0.5
1,974,555	-				-0.1
1,974,555	-				+1.2
1,974,555	-				+0.0
1,974,555	-				+2.9
1,974,601	-				+0.4
1,974,601	-				+0.7
1,974,681	-		CCNA_01843	0.15	+0.2
1,974,682	+		CCNA_01843	0.15	+0.6
1,974,760	+		CCNA_01843	0.20	+1.1
1,974,760	+		CCNA_01843	0.20	+1.3
1,974,761	-		CCNA_01843	0.20	-1.4
1,974,768	-		CCNA_01843	0.20	-0.9
1,974,768	-		CCNA_01843	0.20	+1.7
1,974,783	+		CCNA_01843	0.21	-0.9
1,974,791	-		CCNA_01843	0.22	+1.3
1,974,802	-		CCNA_01843	0.22	+1.5
1,974,806	+		CCNA_01843	0.22	+1.4
1,974,811	+		CCNA_01843	0.23	+0.7
1,974,811	+		CCNA_01843	0.23	+0.6
1,974,811	+		CCNA_01843	0.23	-0.1
1,974,811	+		CCNA_01843	0.23	-1.4
1,974,819	-		CCNA_01843	0.23	-2.1
1,974,819	-		CCNA_01843	0.23	-0.3
1,974,819	-		CCNA_01843	0.23	+1.0
1,974,830	-		CCNA_01843	0.24	-0.6
1,974,846	-		CCNA_01843	0.25	-1.6
1,974,897	+		CCNA_01843	0.28	-1.5
1,974,898	+		CCNA_01843	0.28	-1.0
1,974,903	+		CCNA_01843	0.29	+0.8
1,974,903	+		CCNA_01843	0.29	-0.2
1,974,903	+		CCNA_01843	0.29	-0.2
1,974,911	-		CCNA_01843	0.29	+0.8
1,974,911	-		CCNA_01843	0.29	+0.1
1,974,911	-		CCNA_01843	0.29	+1.3
1,974,912	-		CCNA_01843	0.29	-1.5
1,974,916	+		CCNA_01843	0.29	-2.0
1,974,924	-		CCNA_01843	0.30	+0.9
1,974,924	-		CCNA_01843	0.30	+0.7
1,974,926	+		CCNA_01843	0.30	+0.1
1,974,961	-		CCNA_01843	0.32	+0.1
1,974,989	-		CCNA_01843	0.34	-0.3
1,974,994	+		CCNA_01843	0.34	+0.7
1,975,016	+		CCNA_01843	0.36	-0.0
1,975,016	+		CCNA_01843	0.36	+0.8
1,975,024	-		CCNA_01843	0.36	-0.4
1,975,024	-		CCNA_01843	0.36	+0.1
1,975,064	+		CCNA_01843	0.39	+1.3
1,975,070	-		CCNA_01843	0.39	-0.1
1,975,077	-		CCNA_01843	0.40	+0.8
1,975,086	+		CCNA_01843	0.40	+1.8
1,975,094	-		CCNA_01843	0.41	+1.6
1,975,094	-				+2.9
1,975,104	+		CCNA_01843	0.41	+0.6
1,975,139	+		CCNA_01843	0.44	+4.5
1,975,142	+		CCNA_01843	0.44	+1.8
1,975,150	+		CCNA_01843	0.44	-0.6
1,975,150	-		CCNA_01843	0.44	+0.9
1,975,173	+		CCNA_01843	0.46	-0.2
1,975,241	-		CCNA_01843	0.50	-0.6
1,975,248	-		CCNA_01843	0.51	-1.0
1,975,258	+		CCNA_01843	0.51	+0.6
1,975,258	+		CCNA_01843	0.51	-0.2
1,975,287	-		CCNA_01843	0.53	-1.6
1,975,311	-		CCNA_01843	0.54	-0.9
1,975,323	+		CCNA_01843	0.55	-2.1
1,975,353	-		CCNA_01843	0.57	-0.7
1,975,357	+		CCNA_01843	0.57	-0.8
1,975,364	-		CCNA_01843	0.58	-1.9
1,975,384	-		CCNA_01843	0.59	+0.8
1,975,392	+		CCNA_01843	0.60	+0.6
1,975,401	-		CCNA_01843	0.60	+0.4
1,975,401	-		CCNA_01843	0.60	-0.3
1,975,504	+		CCNA_01843	0.67	+1.0
1,975,533	+		CCNA_01843	0.69	+0.6
1,975,549	-		CCNA_01843	0.70	-0.9
1,975,574	+		CCNA_01843	0.71	-0.8
1,975,582	-		CCNA_01843	0.72	+0.8
1,975,645	+		CCNA_01843	0.76	+2.1
1,975,658	-		CCNA_01843	0.76	+0.4
1,975,668	+		CCNA_01843	0.77	+0.8
1,975,675	+		CCNA_01843	0.78	-0.9
1,975,676	-		CCNA_01843	0.78	-0.8
1,975,683	-		CCNA_01843	0.78	-0.8
1,975,714	-		CCNA_01843	0.80	+1.2
1,975,737	-		CCNA_01843	0.81	+0.6
1,975,737	-		CCNA_01843	0.81	+0.2
1,975,739	+		CCNA_01843	0.82	+1.1
1,975,762	+		CCNA_01843	0.83	+0.8
1,975,765	+		CCNA_01843	0.83	-1.1
1,975,774	+		CCNA_01843	0.84	+0.8
1,975,782	-		CCNA_01843	0.84	+2.0
1,975,784	-		CCNA_01843	0.84	+0.3
1,975,841	-		CCNA_01843	0.88	+0.6
1,975,849	+		CCNA_01843	0.89	+0.2
1,975,861	+		CCNA_01843	0.89	+0.6
1,975,868	+		CCNA_01843	0.90	-2.7
1,975,868	+		CCNA_01843	0.90	+1.0
1,975,868	+		CCNA_01843	0.90	-1.1
1,975,868	+		CCNA_01843	0.90	+2.0
1,975,868	+		CCNA_01843	0.90	+1.1
1,975,868	+		CCNA_01843	0.90	+0.9
1,975,868	+		CCNA_01843	0.90	-0.7
1,975,868	+		CCNA_01843	0.90	+1.9
1,975,868	+		CCNA_01843	0.90	+0.3
1,975,868	+		CCNA_01843	0.90	-0.6
1,975,868	+		CCNA_01843	0.90	+1.1
1,975,868	+		CCNA_01843	0.90	-1.2
1,975,868	+		CCNA_01843	0.90	-0.2
1,975,868	+		CCNA_01843	0.90	-0.2
1,975,868	+		CCNA_01843	0.90	+0.9
1,975,868	+		CCNA_01843	0.90	+0.3
1,975,876	-				+0.9
1,975,876	-				-2.6
1,975,876	-				-0.9
1,975,876	-				+0.9
1,975,876	-				-0.3
1,975,876	-				+0.8
1,975,876	-				-0.1
1,975,895	+				+0.6
1,975,904	+				-1.7
1,975,941	+				-0.2
1,975,944	-				-0.6
1,975,949	-				+1.0
1,975,949	-				-0.6
1,975,956	+				+0.0
1,975,956	+				+1.3
1,975,964	-				+1.3
1,975,964	-				-0.3
1,975,965	-				+0.2
1,975,985	+				+0.9
1,975,985	+				+0.1
1,975,993	-				-1.2
1,976,153	-				-0.2
1,976,153	-				+0.5
1,976,153	-				+0.1
1,976,163	-				-0.4
1,976,183	-				+0.1
1,976,183	-				-0.3
1,976,191	+				+1.0
1,976,307	-		CCNA_01844	0.21	-0.4
1,976,325	-		CCNA_01844	0.24	+0.1
1,976,325	-		CCNA_01844	0.24	+1.3
1,976,325	-		CCNA_01844	0.24	+0.6
1,976,332	+		CCNA_01844	0.25	-0.7
1,976,348	+		CCNA_01844	0.27	-1.1
1,976,364	-		CCNA_01844	0.30	+0.2
1,976,400	-		CCNA_01844	0.36	-0.6
1,976,409	+		CCNA_01844	0.37	+0.5
1,976,484	-		CCNA_01844	0.49	+0.4
1,976,484	-		CCNA_01844	0.49	+0.1
1,976,517	-		CCNA_01844	0.54	+0.4
1,976,531	+		CCNA_01844	0.56	-2.3
1,976,541	+		CCNA_01844	0.58	+0.9
1,976,564	-		CCNA_01844	0.62	+1.3
1,976,625	-		CCNA_01844	0.71	+0.7
1,976,625	-		CCNA_01844	0.71	+1.1
1,976,626	-		CCNA_01844	0.72	-0.1
1,976,633	-		CCNA_01844	0.73	+0.1
1,976,633	-		CCNA_01844	0.73	-1.6
1,976,649	+		CCNA_01844	0.75	+2.1
1,976,674	-		CCNA_01844	0.79	+0.8
1,976,729	-		CCNA_01844	0.88	-0.3
1,976,734	+		CCNA_01844	0.89	+1.1
1,976,734	+		CCNA_01844	0.89	-0.3
1,976,777	-				+3.3
1,976,810	-				+0.7
1,976,810	-				+0.5
1,976,831	+				-0.4
1,976,837	-				-0.6
1,976,849	+				-0.1
1,976,851	-				-1.7
1,976,862	-				+0.2
1,976,864	+				-0.6
1,976,892	-				+0.7
1,976,924	+				-2.2
1,976,929	+				+0.7
1,976,950	-				-2.5
1,976,971	+				-0.4