Experiment: KB-half, Pseudo5 supernatant
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20625 and AO356_20630 overlap by 1 nucleotides AO356_20630 and AO356_20635 are separated by 19 nucleotides
AO356_20625: AO356_20625 - terminase, at 4,597,767 to 4,599,521
_20625
AO356_20630: AO356_20630 - Presumed portal vertex protein, at 4,599,521 to 4,600,522
_20630
AO356_20635: AO356_20635 - hypothetical protein, at 4,600,542 to 4,601,480
_20635
Position (kb) 4599
4600
4601 Strain fitness (log2 ratio) -1
0
1
2 at 4598.595 kb on + strand, within AO356_20625 at 4598.595 kb on + strand, within AO356_20625 at 4598.632 kb on - strand, within AO356_20625 at 4599.516 kb on + strand at 4600.142 kb on + strand, within AO356_20630 at 4600.275 kb on + strand, within AO356_20630 at 4600.275 kb on + strand, within AO356_20630 at 4600.276 kb on - strand, within AO356_20630 at 4600.433 kb on - strand at 4600.433 kb on - strand at 4600.433 kb on - strand at 4600.434 kb on + strand at 4600.435 kb on - strand at 4600.711 kb on + strand, within AO356_20635 at 4600.712 kb on - strand, within AO356_20635 at 4600.771 kb on - strand, within AO356_20635 at 4600.771 kb on - strand, within AO356_20635 at 4600.775 kb on - strand, within AO356_20635 at 4600.815 kb on - strand, within AO356_20635 at 4600.828 kb on + strand, within AO356_20635 at 4600.867 kb on - strand, within AO356_20635 at 4600.972 kb on + strand, within AO356_20635 at 4600.973 kb on - strand, within AO356_20635 at 4600.996 kb on - strand, within AO356_20635 at 4601.052 kb on - strand, within AO356_20635 at 4601.070 kb on - strand, within AO356_20635 at 4601.095 kb on - strand, within AO356_20635 at 4601.220 kb on - strand, within AO356_20635 at 4601.300 kb on - strand, within AO356_20635 at 4601.346 kb on + strand, within AO356_20635 at 4601.425 kb on - strand at 4601.501 kb on + strand at 4601.510 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB-half, Pseudo5 supernatant remove 4,598,595 + AO356_20625 0.47 +1.4 4,598,595 + AO356_20625 0.47 +0.9 4,598,632 - AO356_20625 0.49 +1.8 4,599,516 + +0.0 4,600,142 + AO356_20630 0.62 -0.5 4,600,275 + AO356_20630 0.75 -1.4 4,600,275 + AO356_20630 0.75 -0.5 4,600,276 - AO356_20630 0.75 -0.3 4,600,433 - +2.0 4,600,433 - +0.5 4,600,433 - -0.5 4,600,434 + -0.1 4,600,435 - +1.1 4,600,711 + AO356_20635 0.18 +1.2 4,600,712 - AO356_20635 0.18 +0.7 4,600,771 - AO356_20635 0.24 +0.9 4,600,771 - AO356_20635 0.24 +0.7 4,600,775 - AO356_20635 0.25 -1.5 4,600,815 - AO356_20635 0.29 +0.0 4,600,828 + AO356_20635 0.30 +0.8 4,600,867 - AO356_20635 0.35 +1.0 4,600,972 + AO356_20635 0.46 +0.9 4,600,973 - AO356_20635 0.46 +0.5 4,600,996 - AO356_20635 0.48 +0.5 4,601,052 - AO356_20635 0.54 +0.3 4,601,070 - AO356_20635 0.56 +1.5 4,601,095 - AO356_20635 0.59 +1.0 4,601,220 - AO356_20635 0.72 +0.6 4,601,300 - AO356_20635 0.81 -0.1 4,601,346 + AO356_20635 0.86 -0.4 4,601,425 - +1.0 4,601,501 + -0.4 4,601,510 - -0.1
Or see this region's nucleotide sequence