Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_16400

Experiment: KB-half, Pseudo5 supernatant

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB-half, Pseudo5 supernatant
3,704,184	+		AO356_16395	0.73	+1.3
3,704,185	-		AO356_16395	0.73	+0.1
3,704,449	-		AO356_16395	0.86	+2.4
3,704,449	-		AO356_16395	0.86	-0.3
3,704,554	+				-0.6
3,704,662	+				+0.7
3,704,732	+				+1.7
3,704,733	-				+0.7
3,704,733	-				+1.3
3,704,733	-				+0.7
3,704,753	-				+2.5
3,704,753	-				+1.3
3,704,753	-				+1.3
3,704,802	+				-0.3
3,704,802	+				+1.7
3,704,803	-				+1.7
3,704,819	+				-0.3
3,704,819	+				+1.3
3,704,820	-				-0.3
3,704,854	+				+0.1
3,704,854	+				+0.7
3,704,854	+				+0.1
3,704,854	+				+0.3
3,704,898	+				-0.3
3,704,898	+				+0.1
3,704,898	+				-0.3
3,704,899	-				+1.5
3,704,912	-				-1.0
3,704,913	+				+0.9
3,704,913	+				+0.7
3,704,913	+				+0.7
3,704,913	+				+0.7
3,704,913	+				-1.5
3,704,913	+				+1.3
3,704,914	-				+0.7
3,704,914	-				+2.1
3,704,914	-				+2.3
3,704,914	-				+2.7
3,704,914	-				-0.3
3,704,921	+				+0.7
3,704,922	-				+0.2
3,704,998	+				-0.4
3,704,999	-				+1.7
3,704,999	-				+2.7
3,705,066	+				-0.3
3,705,067	-				+1.3
3,705,067	-				+1.0
3,705,085	-				-0.3
3,705,094	-				-0.1
3,705,221	-		AO356_16400	0.12	+1.7
3,705,241	+		AO356_16400	0.13	+0.1
3,705,241	+		AO356_16400	0.13	+0.4
3,705,241	+		AO356_16400	0.13	-1.9
3,705,241	+		AO356_16400	0.13	-1.1
3,705,241	+		AO356_16400	0.13	+0.1
3,705,241	+		AO356_16400	0.13	+1.3
3,705,241	+		AO356_16400	0.13	+0.1
3,705,241	+		AO356_16400	0.13	-0.1
3,705,241	+		AO356_16400	0.13	-2.0
3,705,241	+		AO356_16400	0.13	+0.1
3,705,242	-		AO356_16400	0.13	+2.5
3,705,242	-		AO356_16400	0.13	+1.3
3,705,242	-		AO356_16400	0.13	+1.7
3,705,242	-		AO356_16400	0.13	-0.3
3,705,242	-		AO356_16400	0.13	-0.7
3,705,242	-		AO356_16400	0.13	+0.7
3,705,428	+		AO356_16400	0.29	+0.5
3,705,428	+		AO356_16400	0.29	-0.3
3,705,429	-		AO356_16400	0.29	-1.0
3,705,429	-		AO356_16400	0.29	+1.6
3,705,602	-		AO356_16400	0.43	-0.3
3,705,661	+		AO356_16400	0.48	-0.3
3,705,738	-		AO356_16400	0.54	+0.7
3,705,796	+		AO356_16400	0.59	-1.3
3,705,796	+		AO356_16400	0.59	+0.1
3,705,796	+		AO356_16400	0.59	+0.7
3,705,797	-		AO356_16400	0.59	-1.0
3,705,802	+		AO356_16400	0.59	+0.6
3,705,802	+		AO356_16400	0.59	-0.2
3,705,802	+		AO356_16400	0.59	-0.7
3,705,802	+		AO356_16400	0.59	-0.3
3,705,802	+		AO356_16400	0.59	+0.5
3,705,802	+		AO356_16400	0.59	-1.3
3,705,802	+		AO356_16400	0.59	+1.5
3,705,802	+		AO356_16400	0.59	+0.9
3,705,802	+		AO356_16400	0.59	-0.9
3,705,802	+		AO356_16400	0.59	-1.3
3,705,803	-		AO356_16400	0.59	+0.3
3,705,803	-		AO356_16400	0.59	-0.3
3,705,803	-		AO356_16400	0.59	-0.3
3,705,803	-		AO356_16400	0.59	+1.1
3,705,803	-		AO356_16400	0.59	-2.3
3,705,803	-		AO356_16400	0.59	-0.0
3,705,803	-		AO356_16400	0.59	+2.5
3,705,803	-		AO356_16400	0.59	+0.2
3,705,803	-		AO356_16400	0.59	+1.3
3,705,803	-		AO356_16400	0.59	-1.3
3,705,823	+		AO356_16400	0.61	-1.3
3,705,823	+		AO356_16400	0.61	+0.3
3,705,823	+		AO356_16400	0.61	+0.7
3,705,824	-		AO356_16400	0.61	+1.1
3,705,824	-		AO356_16400	0.61	+2.5
3,705,824	-		AO356_16400	0.61	+1.3
3,705,835	+		AO356_16400	0.62	+1.1
3,705,836	-		AO356_16400	0.62	+0.7
3,705,836	-		AO356_16400	0.62	-0.5
3,705,836	-		AO356_16400	0.62	+0.5
3,705,880	+		AO356_16400	0.66	+0.7
3,705,880	+		AO356_16400	0.66	+0.7
3,705,880	+		AO356_16400	0.66	+0.2
3,705,880	+		AO356_16400	0.66	-1.6
3,705,880	+		AO356_16400	0.66	-0.3
3,705,881	-		AO356_16400	0.66	-1.3
3,705,881	-		AO356_16400	0.66	+1.3
3,705,881	-		AO356_16400	0.66	+0.3
3,705,881	-		AO356_16400	0.66	-1.3
3,705,881	-		AO356_16400	0.66	+0.5
3,706,093	+		AO356_16400	0.83	-0.7
3,706,094	-		AO356_16400	0.83	+2.1
3,706,094	-		AO356_16400	0.83	-1.9
3,706,219	+				+0.7
3,706,219	+				+0.3
3,706,219	+				+2.5
3,706,219	+				+1.1
3,706,219	+				-1.9
3,706,219	+				-0.8
3,706,219	+				+0.1
3,706,219	+				+0.1
3,706,219	+				+0.6
3,706,219	+				+1.3
3,706,219	+				-0.3
3,706,220	-				-0.3
3,706,220	-				-0.3
3,706,220	-				+0.7
3,706,220	-				+1.5
3,706,220	-				-0.0
3,706,220	-				-1.3
3,706,220	-				+1.0
3,706,225	+				+1.3
3,706,225	+				-0.3
3,706,225	+				+0.9
3,706,225	+				-1.5
3,706,225	+				-1.3
3,706,225	+				+0.7
3,706,225	+				+0.7
3,706,226	-				+0.6
3,706,226	-				-0.8
3,706,226	-				+0.7
3,706,226	-				+1.7
3,706,226	-				-0.3
3,706,226	-				+0.7
3,706,285	-				-1.3
3,706,368	+				+1.7
3,706,374	+				+0.7
3,706,375	-				-0.9
3,706,507	+		AO356_16405	0.14	+0.4
3,706,507	+		AO356_16405	0.14	+0.7
3,706,507	+		AO356_16405	0.14	+0.7
3,706,507	+		AO356_16405	0.14	+2.3
3,706,508	-		AO356_16405	0.14	-2.3
3,706,508	-		AO356_16405	0.14	-0.0
3,706,508	-		AO356_16405	0.14	+0.5
3,706,508	-		AO356_16405	0.14	-1.3
3,706,508	-		AO356_16405	0.14	+1.3
3,706,508	-		AO356_16405	0.14	-0.3
3,706,576	+		AO356_16405	0.20	+0.3
3,706,576	+		AO356_16405	0.20	-0.3
3,706,576	+		AO356_16405	0.20	+1.5
3,706,576	+		AO356_16405	0.20	+1.3
3,706,576	+		AO356_16405	0.20	+0.1
3,706,576	+		AO356_16405	0.20	+1.1
3,706,576	+		AO356_16405	0.20	-0.3
3,706,577	-		AO356_16405	0.20	-1.0
3,706,670	-		AO356_16405	0.29	+2.3
3,706,678	+		AO356_16405	0.30	+0.7
3,706,679	-		AO356_16405	0.30	-0.3
3,706,791	+		AO356_16405	0.40	+1.1
3,706,791	+		AO356_16405	0.40	-0.3
3,706,792	-		AO356_16405	0.40	+0.7
3,706,792	-		AO356_16405	0.40	+0.1
3,706,792	-		AO356_16405	0.40	-1.3
3,706,792	-		AO356_16405	0.40	-1.0
3,706,792	-		AO356_16405	0.40	-1.6
3,706,806	+		AO356_16405	0.42	-0.3
3,706,807	-		AO356_16405	0.42	-1.6
3,706,884	+		AO356_16405	0.49	-0.5
3,706,885	-		AO356_16405	0.49	-0.7
3,706,885	-		AO356_16405	0.49	-0.6
3,706,885	-		AO356_16405	0.49	-0.3
3,706,987	+		AO356_16405	0.59	+1.3
3,707,164	-		AO356_16405	0.75	+1.1