Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12110

Experiment: KB-half, Pseudo5 supernatant

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB-half, Pseudo5 supernatant
2,753,616	+		AO356_12105	0.55	+0.1
2,753,616	+		AO356_12105	0.55	+0.3
2,753,616	+		AO356_12105	0.55	+0.6
2,753,616	+		AO356_12105	0.55	+0.3
2,753,617	-		AO356_12105	0.55	-0.2
2,753,617	-		AO356_12105	0.55	-1.1
2,753,617	-		AO356_12105	0.55	+0.1
2,753,617	-		AO356_12105	0.55	+0.7
2,753,617	-		AO356_12105	0.55	-0.1
2,753,617	-		AO356_12105	0.55	+1.4
2,753,690	+		AO356_12105	0.59	+0.5
2,753,690	+		AO356_12105	0.59	-0.3
2,753,690	+		AO356_12105	0.59	-1.0
2,753,690	+		AO356_12105	0.59	+0.1
2,753,691	-		AO356_12105	0.59	-0.2
2,753,691	-		AO356_12105	0.59	+0.6
2,753,691	-		AO356_12105	0.59	+1.1
2,753,691	-		AO356_12105	0.59	+1.2
2,753,691	-		AO356_12105	0.59	-1.5
2,753,718	+		AO356_12105	0.60	-0.3
2,753,719	-		AO356_12105	0.60	+0.2
2,753,760	+		AO356_12105	0.62	+1.6
2,753,760	+		AO356_12105	0.62	+1.3
2,753,761	-		AO356_12105	0.62	-0.9
2,753,775	+		AO356_12105	0.62	+1.1
2,753,775	+		AO356_12105	0.62	+2.1
2,753,775	+		AO356_12105	0.62	-2.2
2,753,775	+		AO356_12105	0.62	+0.1
2,753,775	+		AO356_12105	0.62	-0.2
2,753,776	-		AO356_12105	0.62	-0.9
2,753,776	-		AO356_12105	0.62	-1.6
2,753,776	-		AO356_12105	0.62	-1.9
2,753,776	-		AO356_12105	0.62	+0.9
2,753,776	-		AO356_12105	0.62	+1.1
2,753,784	+		AO356_12105	0.63	-0.2
2,753,784	+		AO356_12105	0.63	+0.3
2,753,785	-		AO356_12105	0.63	-0.4
2,753,785	-		AO356_12105	0.63	-0.1
2,753,787	+		AO356_12105	0.63	-0.4
2,753,787	+		AO356_12105	0.63	-0.5
2,753,787	+		AO356_12105	0.63	+0.5
2,753,787	+		AO356_12105	0.63	-0.1
2,753,787	+		AO356_12105	0.63	+1.7
2,753,787	+		AO356_12105	0.63	-0.3
2,753,788	-		AO356_12105	0.63	+0.2
2,753,788	-		AO356_12105	0.63	+0.2
2,753,788	-		AO356_12105	0.63	-0.2
2,753,808	+		AO356_12105	0.64	-0.6
2,753,857	+		AO356_12105	0.66	-0.7
2,753,857	+		AO356_12105	0.66	-0.7
2,753,934	+		AO356_12105	0.70	-0.2
2,753,934	+		AO356_12105	0.70	+1.7
2,753,934	+		AO356_12105	0.70	+2.2
2,753,934	+		AO356_12105	0.70	-0.1
2,753,934	+		AO356_12105	0.70	-0.3
2,753,934	+		AO356_12105	0.70	+0.7
2,753,934	+		AO356_12105	0.70	-0.8
2,753,934	+		AO356_12105	0.70	+1.7
2,753,934	+		AO356_12105	0.70	+0.9
2,753,934	+		AO356_12105	0.70	-0.4
2,753,935	-		AO356_12105	0.70	-0.1
2,753,935	-		AO356_12105	0.70	+0.3
2,753,935	-		AO356_12105	0.70	-0.1
2,753,935	-		AO356_12105	0.70	+0.1
2,753,935	-		AO356_12105	0.70	-0.6
2,753,964	+		AO356_12105	0.71	-0.2
2,753,964	+		AO356_12105	0.71	-0.7
2,753,965	-		AO356_12105	0.71	+0.5
2,753,965	-		AO356_12105	0.71	+3.2
2,753,965	-		AO356_12105	0.71	+0.2
2,754,029	+		AO356_12105	0.74	-0.7
2,754,030	-		AO356_12105	0.74	-0.5
2,754,030	-		AO356_12105	0.74	+0.3
2,754,030	-		AO356_12105	0.74	-0.7
2,754,030	-		AO356_12105	0.74	-0.2
2,754,036	-		AO356_12105	0.74	-1.1
2,754,121	-		AO356_12105	0.78	+0.5
2,754,130	-		AO356_12105	0.79	-0.6
2,754,298	-		AO356_12105	0.86	+0.1
2,754,324	+		AO356_12105	0.88	-1.1
2,754,324	+		AO356_12105	0.88	+3.1
2,754,324	+		AO356_12105	0.88	+0.7
2,754,325	-		AO356_12105	0.88	-1.2
2,754,345	+		AO356_12105	0.89	+0.1
2,754,345	+		AO356_12105	0.89	+0.1
2,754,346	-		AO356_12105	0.89	-0.4
2,754,346	-		AO356_12105	0.89	-0.9
2,754,346	-		AO356_12105	0.89	+0.2
2,754,361	+		AO356_12105	0.89	+0.4
2,754,361	+		AO356_12105	0.89	+1.1
2,754,362	-		AO356_12105	0.89	+0.8
2,754,362	-		AO356_12105	0.89	-0.2
2,754,362	-		AO356_12105	0.89	+0.2
2,754,381	+				-0.4
2,754,381	+				+0.0
2,754,381	+				-0.3
2,754,381	+				-0.5
2,754,382	-				-1.2
2,754,382	-				+0.5
2,754,397	+				-0.9
2,754,429	+				+0.1
2,754,430	-				+0.5
2,754,430	-				+0.3
2,754,430	-				+0.7
2,754,430	-				+0.7
2,754,459	+				+1.4
2,754,459	+				+0.1
2,754,459	+				-1.8
2,754,459	+				+0.4
2,754,460	-				+0.2
2,754,460	-				+1.1
2,754,460	-				+0.1
2,754,460	-				-0.1
2,754,460	-				+1.7
2,754,474	+				+0.1
2,754,474	+				-0.9
2,754,474	+				+0.7
2,754,475	-				+0.2
2,754,523	+				-0.4
2,754,523	+				+0.7
2,754,523	+				-0.2
2,754,523	+				-1.5
2,754,523	+				+0.1
2,754,523	+				+0.5
2,754,524	-				+0.6
2,754,592	+				-0.3
2,754,592	+				+1.2
2,754,592	+				+0.7
2,754,592	+				+0.9
2,754,593	-				-0.5
2,754,593	-				+0.1
2,754,593	-				-0.1
2,754,593	-				-0.8
2,754,593	-				+0.1
2,754,593	-				+0.8
2,754,593	-				+1.3
2,754,593	-				+0.4
2,754,593	-				+0.9
2,754,606	-				-0.1
2,754,612	+				-0.5
2,754,613	-				+0.1
2,754,623	+				+0.6
2,754,624	-				+0.3
2,754,624	-				+1.0
2,754,624	-				-0.1
2,754,628	-				+0.5
2,754,628	-				+0.8
2,754,628	-				+0.3
2,754,628	-				+0.1
2,754,628	-				+0.3
2,754,695	+		AO356_12110	0.12	-0.2
2,754,711	+		AO356_12110	0.14	-1.5
2,754,711	+		AO356_12110	0.14	+0.2
2,754,711	+		AO356_12110	0.14	+0.5
2,754,712	-		AO356_12110	0.14	+1.7
2,754,756	+		AO356_12110	0.20	-1.5
2,754,756	+		AO356_12110	0.20	+1.4
2,754,757	-		AO356_12110	0.20	+2.1
2,754,757	-		AO356_12110	0.20	-0.4
2,754,757	-		AO356_12110	0.20	-0.6
2,754,757	-		AO356_12110	0.20	+0.7
2,754,757	-		AO356_12110	0.20	+0.9
2,754,757	-		AO356_12110	0.20	+0.5
2,754,757	-		AO356_12110	0.20	+0.2
2,754,757	-		AO356_12110	0.20	+0.1
2,754,767	+		AO356_12110	0.21	-1.5
2,754,767	+		AO356_12110	0.21	+0.1
2,754,767	+		AO356_12110	0.21	+0.1
2,754,767	+		AO356_12110	0.21	-1.5
2,754,767	+		AO356_12110	0.21	+0.1
2,754,767	+		AO356_12110	0.21	-1.7
2,754,767	+		AO356_12110	0.21	+0.1
2,754,767	+		AO356_12110	0.21	-0.7
2,754,767	+		AO356_12110	0.21	+0.3
2,754,768	-		AO356_12110	0.21	-0.1
2,754,768	-		AO356_12110	0.21	-0.5
2,754,768	-		AO356_12110	0.21	-0.9
2,754,768	-		AO356_12110	0.21	+1.0
2,754,768	-		AO356_12110	0.21	+0.8
2,754,768	-		AO356_12110	0.21	+0.1
2,754,768	-		AO356_12110	0.21	+3.1
2,754,768	-		AO356_12110	0.21	+1.7
2,754,768	-		AO356_12110	0.21	+1.9
2,754,768	-		AO356_12110	0.21	+0.4
2,754,768	-		AO356_12110	0.21	+1.2
2,754,836	+		AO356_12110	0.30	-0.3
2,754,836	+		AO356_12110	0.30	+2.4
2,754,836	+		AO356_12110	0.30	+0.7
2,754,836	+		AO356_12110	0.30	-0.8
2,754,837	-		AO356_12110	0.30	+1.1
2,754,837	-		AO356_12110	0.30	-0.7
2,754,995	+		AO356_12110	0.51	+1.1
2,754,995	+		AO356_12110	0.51	-1.1
2,754,995	+		AO356_12110	0.51	+1.4
2,754,995	+		AO356_12110	0.51	+0.9
2,754,995	+		AO356_12110	0.51	+0.1
2,754,996	-		AO356_12110	0.51	+0.7
2,754,996	-		AO356_12110	0.51	-0.3
2,754,996	-		AO356_12110	0.51	-1.1
2,754,996	-		AO356_12110	0.51	+0.8
2,754,996	-		AO356_12110	0.51	+1.1
2,754,996	-		AO356_12110	0.51	+1.1
2,754,996	-		AO356_12110	0.51	-0.2
2,754,996	-		AO356_12110	0.51	-0.1
2,754,996	-		AO356_12110	0.51	-0.2
2,754,996	-		AO356_12110	0.51	+0.4
2,755,048	-		AO356_12110	0.57	-0.5
2,755,157	+		AO356_12110	0.71	-0.6
2,755,157	+		AO356_12110	0.71	+0.4
2,755,157	+		AO356_12110	0.71	+0.8
2,755,158	-		AO356_12110	0.72	+0.8
2,755,158	-		AO356_12110	0.72	+0.3
2,755,197	+		AO356_12110	0.77	+2.7
2,755,197	+		AO356_12110	0.77	-2.7
2,755,197	+		AO356_12110	0.77	-0.3
2,755,197	+		AO356_12110	0.77	+0.3
2,755,197	+		AO356_12110	0.77	-0.1
2,755,198	-		AO356_12110	0.77	+0.3
2,755,198	-		AO356_12110	0.77	-0.3
2,755,198	-		AO356_12110	0.77	+1.2
2,755,198	-		AO356_12110	0.77	+0.3
2,755,198	-		AO356_12110	0.77	+0.1
2,755,199	+		AO356_12110	0.77	+0.4
2,755,199	+		AO356_12110	0.77	+0.3
2,755,199	+		AO356_12110	0.77	+0.3
2,755,200	-		AO356_12110	0.77	+0.7
2,755,241	+		AO356_12110	0.82	+0.1
2,755,241	+		AO356_12110	0.82	-0.9
2,755,241	+		AO356_12110	0.82	-0.2
2,755,241	+		AO356_12110	0.82	+0.3
2,755,241	+		AO356_12110	0.82	-1.9
2,755,241	+		AO356_12110	0.82	+1.1
2,755,241	+		AO356_12110	0.82	-0.9
2,755,241	+		AO356_12110	0.82	+1.7
2,755,241	+		AO356_12110	0.82	+0.7
2,755,242	-		AO356_12110	0.82	-0.5
2,755,242	-		AO356_12110	0.82	-1.5
2,755,242	-		AO356_12110	0.82	+0.3
2,755,242	-		AO356_12110	0.82	-0.7
2,755,242	-		AO356_12110	0.82	-0.2
2,755,242	-		AO356_12110	0.82	-0.9
2,755,244	+		AO356_12110	0.83	+1.2
2,755,244	+		AO356_12110	0.83	+1.2
2,755,244	+		AO356_12110	0.83	-0.3
2,755,244	+		AO356_12110	0.83	-0.7
2,755,244	+		AO356_12110	0.83	-1.1
2,755,244	+		AO356_12110	0.83	+0.4
2,755,244	+		AO356_12110	0.83	+0.7
2,755,244	+		AO356_12110	0.83	+0.1
2,755,245	-		AO356_12110	0.83	+0.1
2,755,245	-		AO356_12110	0.83	-0.3
2,755,245	-		AO356_12110	0.83	+0.1
2,755,245	-		AO356_12110	0.83	-0.7
2,755,245	-		AO356_12110	0.83	+0.1
2,755,259	+		AO356_12110	0.85	-0.4
2,755,293	+		AO356_12110	0.89	+2.2
2,755,293	+		AO356_12110	0.89	+0.5
2,755,456	-				-0.7
2,755,456	-				-0.3
2,755,456	-				-0.5
2,755,465	+		AO356_12115	0.11	+2.0
2,755,480	+		AO356_12115	0.12	+1.7
2,755,480	+		AO356_12115	0.12	+1.5
2,755,480	+		AO356_12115	0.12	-0.5
2,755,481	-		AO356_12115	0.13	-0.1
2,755,481	-		AO356_12115	0.13	-0.2
2,755,481	-		AO356_12115	0.13	-1.5
2,755,481	-		AO356_12115	0.13	-0.7
2,755,481	-		AO356_12115	0.13	+0.7
2,755,726	+		AO356_12115	0.41	+1.1
2,755,726	+		AO356_12115	0.41	+0.8
2,755,726	+		AO356_12115	0.41	+1.1
2,755,726	+		AO356_12115	0.41	-0.6
2,755,727	-		AO356_12115	0.41	-0.9
2,755,777	+		AO356_12115	0.47	+1.0
2,755,804	+		AO356_12115	0.50	-0.1
2,755,804	+		AO356_12115	0.50	-0.4
2,755,814	-		AO356_12115	0.51	+1.7
2,755,873	+		AO356_12115	0.58	+0.3
2,755,874	-		AO356_12115	0.58	-0.1
2,756,006	+		AO356_12115	0.74	-0.2
2,756,006	+		AO356_12115	0.74	+1.7
2,756,007	-		AO356_12115	0.74	-0.2
2,756,007	-		AO356_12115	0.74	+0.8
2,756,083	+		AO356_12115	0.83	-0.3
2,756,083	+		AO356_12115	0.83	-0.7
2,756,083	+		AO356_12115	0.83	+0.2
2,756,084	-		AO356_12115	0.83	-1.2
2,756,084	-		AO356_12115	0.83	+1.0
2,756,095	+		AO356_12115	0.84	-0.1
2,756,095	+		AO356_12115	0.84	-0.3
2,756,096	-		AO356_12115	0.84	+0.5
2,756,096	-		AO356_12115	0.84	+1.1