Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09565

Experiment: KB-half, Pseudo5 supernatant

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB-half, Pseudo5 supernatant
2,164,576	-		AO356_09560	0.66	+0.5
2,164,587	+		AO356_09560	0.66	-1.1
2,164,588	-		AO356_09560	0.66	-0.1
2,164,769	+		AO356_09560	0.73	-0.7
2,164,770	-		AO356_09560	0.73	+0.9
2,164,770	-		AO356_09560	0.73	-0.1
2,164,770	-		AO356_09560	0.73	+0.5
2,164,883	+		AO356_09560	0.78	-0.1
2,164,884	-		AO356_09560	0.78	-0.2
2,164,982	+		AO356_09560	0.81	+0.2
2,164,982	+		AO356_09560	0.81	-1.7
2,164,982	+		AO356_09560	0.81	-0.7
2,164,982	+		AO356_09560	0.81	-2.7
2,164,983	-		AO356_09560	0.82	-0.1
2,164,983	-		AO356_09560	0.82	+0.7
2,164,983	-		AO356_09560	0.82	-1.4
2,165,030	+		AO356_09560	0.83	-0.1
2,165,030	+		AO356_09560	0.83	+0.5
2,165,030	+		AO356_09560	0.83	-2.7
2,165,031	-		AO356_09560	0.83	+1.5
2,165,031	-		AO356_09560	0.83	-0.1
2,165,146	-		AO356_09560	0.88	-1.1
2,165,417	+				-0.1
2,165,417	+				-0.8
2,165,417	+				-1.1
2,165,417	+				+2.2
2,165,418	-				-0.7
2,165,418	-				+1.2
2,165,418	-				+0.1
2,165,418	-				+0.9
2,165,418	-				+2.2
2,165,440	+				+0.9
2,165,440	+				-1.7
2,165,440	+				-2.7
2,165,440	+				-0.1
2,165,440	+				-1.8
2,165,441	-				-2.1
2,165,441	-				-0.1
2,165,441	-				+0.5
2,165,441	-				-0.7
2,165,448	+				-0.1
2,165,448	+				-0.7
2,165,448	+				-1.4
2,165,448	+				-2.5
2,165,448	+				+0.2
2,165,448	+				-1.7
2,165,448	+				-0.1
2,165,448	+				-2.1
2,165,448	+				-1.1
2,165,448	+				-0.7
2,165,448	+				-0.1
2,165,449	-				-0.1
2,165,449	-				+1.9
2,165,449	-				+1.1
2,165,449	-				-0.4
2,165,449	-				+0.9
2,165,449	-				+1.2
2,165,449	-				+0.9
2,165,449	-				-1.3
2,165,449	-				+1.0
2,165,449	-				+0.3
2,165,449	-				-0.1
2,165,449	-				+1.9
2,165,449	-				+1.3
2,165,451	+				-0.1
2,165,451	+				-2.1
2,165,451	+				-1.1
2,165,451	+				+0.5
2,165,451	+				+1.7
2,165,451	+				-0.1
2,165,451	+				-0.5
2,165,452	-				-0.8
2,165,452	-				+0.9
2,165,452	-				-1.1
2,165,472	+				-0.4
2,165,472	+				-1.1
2,165,473	-				+1.9
2,165,473	-				-0.5
2,165,473	-				-0.1
2,165,473	-				-1.1
2,165,473	-				+0.9
2,165,788	-		AO356_09565	0.19	-1.4
2,165,788	-		AO356_09565	0.19	-0.4
2,165,788	-		AO356_09565	0.19	+0.9
2,165,839	+		AO356_09565	0.22	+1.5
2,165,898	+		AO356_09565	0.25	+0.9
2,166,030	+		AO356_09565	0.33	-2.1
2,166,379	-		AO356_09565	0.52	-0.1
2,166,681	+		AO356_09565	0.69	-0.1
2,166,711	+		AO356_09565	0.71	+0.5
2,166,712	-		AO356_09565	0.71	-1.1
2,166,768	+		AO356_09565	0.74	+1.5
2,166,768	+		AO356_09565	0.74	-1.1
2,166,789	+		AO356_09565	0.76	+0.9
2,166,855	+		AO356_09565	0.79	-0.8
2,166,855	+		AO356_09565	0.79	-0.1
2,166,855	+		AO356_09565	0.79	-1.1
2,166,855	+		AO356_09565	0.79	+0.3
2,166,856	-		AO356_09565	0.79	-2.2
2,166,856	-		AO356_09565	0.79	-1.1
2,166,856	-		AO356_09565	0.79	-0.1
2,166,856	-		AO356_09565	0.79	-0.1
2,166,930	+		AO356_09565	0.83	-0.7
2,166,930	+		AO356_09565	0.83	-0.1
2,166,931	-		AO356_09565	0.84	-0.1
2,166,931	-		AO356_09565	0.84	+0.7
2,166,931	-		AO356_09565	0.84	+0.3
2,166,931	-		AO356_09565	0.84	-0.9
2,166,931	-		AO356_09565	0.84	-1.1
2,166,931	-		AO356_09565	0.84	-0.1
2,167,003	-		AO356_09565	0.88	-2.4
2,167,094	+				+0.7
2,167,094	+				-1.1
2,167,094	+				-1.1
2,167,095	-				-0.8
2,167,095	-				+1.1
2,167,095	-				+0.8
2,167,204	+				+0.9
2,167,204	+				-1.1
2,167,204	+				-1.4
2,167,204	+				-0.1
2,167,204	+				-0.1
2,167,205	-				-0.1
2,167,205	-				+0.4
2,167,213	+				+0.3
2,167,213	+				-1.7
2,167,214	-				-0.1
2,167,214	-				-0.7
2,167,214	-				-1.1
2,167,267	-				+1.9
2,167,267	-				+1.2
2,167,267	-				-0.8
2,167,271	+				-2.4
2,167,271	+				-0.1
2,167,271	+				-2.4
2,167,271	+				-0.1
2,167,271	+				-1.1
2,167,271	+				-0.1
2,167,272	-				-0.5
2,167,272	-				+1.1
2,167,272	-				-0.1
2,167,272	-				+0.9
2,167,272	-				-1.1
2,167,272	-				+0.3
2,167,272	-				-0.8
2,167,272	-				-0.1
2,167,272	-				-0.1
2,167,272	-				-0.1
2,167,272	-				+0.9
2,167,272	-				+0.9
2,167,272	-				-1.1
2,167,390	+				-0.1
2,167,390	+				+1.5
2,167,391	-				-0.7
2,167,391	-				-1.1
2,167,391	-				-1.1
2,167,394	+				+0.7
2,167,394	+				+1.5
2,167,394	+				-1.1
2,167,395	-				-0.1
2,167,395	-				+1.7
2,167,439	+				+0.9
2,167,440	-				-0.1
2,167,440	-				+0.5
2,167,440	-				+1.5
2,167,443	+				-0.1
2,167,443	+				-0.1
2,167,443	+				-0.7
2,167,443	+				+2.2
2,167,444	-				-0.1
2,167,444	-				-0.6
2,167,446	+				+0.9
2,167,472	+				+2.2
2,167,480	+				-0.1
2,167,480	+				-2.4
2,167,480	+				-0.1
2,167,480	+				+0.5
2,167,480	+				-1.7
2,167,481	-				-0.7
2,167,481	-				+0.2
2,167,481	-				+2.5
2,167,481	-				+0.5
2,167,484	+				-1.1
2,167,505	+				-0.1
2,167,536	-				-0.1
2,167,536	-				-0.7
2,167,552	+				-2.1
2,167,552	+				-2.4
2,167,553	-				-0.3
2,167,553	-				+1.5
2,167,553	-				+0.7
2,167,611	+		AO356_09570	0.16	+0.6
2,167,658	+		AO356_09570	0.26	-0.1
2,167,658	+		AO356_09570	0.26	-0.1
2,167,658	+		AO356_09570	0.26	+1.9
2,167,658	+		AO356_09570	0.26	+0.3
2,167,659	-		AO356_09570	0.26	-1.1
2,167,659	-		AO356_09570	0.26	+0.3
2,167,659	-		AO356_09570	0.26	-0.1
2,167,659	-		AO356_09570	0.26	+2.2
2,167,826	+		AO356_09570	0.65	-1.1
2,167,827	-		AO356_09570	0.65	-0.1
2,167,827	-		AO356_09570	0.65	+0.2
2,167,830	+		AO356_09570	0.66	+0.9
2,167,830	+		AO356_09570	0.66	-0.1
2,167,830	+		AO356_09570	0.66	+0.9
2,167,830	+		AO356_09570	0.66	-1.7
2,167,831	-		AO356_09570	0.66	-0.3
2,167,831	-		AO356_09570	0.66	+0.4
2,167,831	-		AO356_09570	0.66	+1.1
2,167,831	-		AO356_09570	0.66	-0.1
2,167,831	-		AO356_09570	0.66	+0.9
2,168,158	+		AO356_09575	0.19	+0.9