Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2365

Experiment: Succinic Acid 31.25 mM; anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid 31.25 mM; anaerobic
2,753,958	+		Rru_A2363	0.55	-2.4
2,753,959	-		Rru_A2363	0.55	+1.6
2,754,013	+		Rru_A2363	0.62	-2.2
2,754,013	+		Rru_A2363	0.62	-1.4
2,754,013	+		Rru_A2363	0.62	-1.3
2,754,013	+		Rru_A2363	0.62	-1.0
2,754,013	+		Rru_A2363	0.62	-0.7
2,754,013	+		Rru_A2363	0.62	-1.5
2,754,013	+		Rru_A2363	0.62	-1.9
2,754,013	+		Rru_A2363	0.62	+2.3
2,754,013	+		Rru_A2363	0.62	-0.4
2,754,014	-		Rru_A2363	0.62	-0.9
2,754,014	-		Rru_A2363	0.62	-3.2
2,754,014	-		Rru_A2363	0.62	-2.3
2,754,014	-		Rru_A2363	0.62	+1.3
2,754,014	-		Rru_A2363	0.62	-0.3
2,754,014	-		Rru_A2363	0.62	-4.1
2,754,014	-		Rru_A2363	0.62	-1.0
2,754,067	+		Rru_A2363	0.69	-0.9
2,754,067	+		Rru_A2363	0.69	-0.9
2,754,067	+		Rru_A2363	0.69	-4.0
2,754,067	+		Rru_A2363	0.69	+2.3
2,754,067	+		Rru_A2363	0.69	-0.1
2,754,067	+		Rru_A2363	0.69	-0.5
2,754,068	-		Rru_A2363	0.70	-1.6
2,754,068	-		Rru_A2363	0.70	+0.7
2,754,235	+				-2.3
2,754,235	+				+0.6
2,754,236	-				-2.8
2,754,236	-				-0.3
2,754,236	-				-1.3
2,754,237	+				-0.0
2,754,237	+				-2.1
2,754,237	+				-1.3
2,754,237	+				-1.8
2,754,237	+				-2.1
2,754,238	-				-0.5
2,754,238	-				+1.3
2,754,238	-				-3.0
2,754,238	-				+2.3
2,754,414	+				-0.5
2,754,415	-				+0.3
2,754,415	-				-1.3
2,754,441	+				-2.0
2,754,441	+				-0.3
2,754,441	+				-2.0
2,754,442	-				+1.9
2,754,442	-				+1.3
2,754,442	-				-0.4
2,754,442	-				+0.1
2,754,538	-		Rru_A2364	0.38	-0.6
2,754,544	+		Rru_A2364	0.40	-0.4
2,754,544	+		Rru_A2364	0.40	+0.4
2,754,545	-		Rru_A2364	0.40	+0.1
2,754,546	+		Rru_A2364	0.40	-0.2
2,754,546	+		Rru_A2364	0.40	-2.1
2,754,546	+		Rru_A2364	0.40	+0.0
2,754,546	+		Rru_A2364	0.40	-1.3
2,754,546	+		Rru_A2364	0.40	-0.5
2,754,547	-		Rru_A2364	0.41	+0.7
2,754,547	-		Rru_A2364	0.41	-1.1
2,754,547	-		Rru_A2364	0.41	-1.4
2,754,579	+		Rru_A2364	0.50	-0.7
2,754,579	+		Rru_A2364	0.50	+0.5
2,754,580	-		Rru_A2364	0.51	+0.4
2,754,580	-		Rru_A2364	0.51	+0.2
2,754,580	-		Rru_A2364	0.51	+1.7
2,754,580	-		Rru_A2364	0.51	-0.2
2,754,580	-		Rru_A2364	0.51	-0.8
2,754,627	+		Rru_A2364	0.65	-0.3
2,754,688	-		Rru_A2364	0.83	+0.6
2,754,721	-				+1.1
2,754,760	+				+0.1
2,754,761	-				-2.8
2,754,856	+				-0.4
2,754,857	-				+0.5
2,754,970	-				+0.2
2,755,078	-				-2.5
2,755,682	+		Rru_A2365	0.31	-3.1
2,755,683	-		Rru_A2365	0.31	-0.6
2,755,822	-		Rru_A2365	0.36	+0.1
2,755,879	+		Rru_A2365	0.39	-3.0
2,755,879	+		Rru_A2365	0.39	+1.0
2,755,880	-		Rru_A2365	0.39	-2.1
2,755,880	-		Rru_A2365	0.39	-0.8
2,755,880	-		Rru_A2365	0.39	-3.9
2,755,880	-		Rru_A2365	0.39	-0.2
2,755,880	-		Rru_A2365	0.39	-0.3
2,755,880	-		Rru_A2365	0.39	-1.9
2,755,880	-		Rru_A2365	0.39	+0.2
2,756,215	+		Rru_A2365	0.52	+0.2
2,756,215	+		Rru_A2365	0.52	+0.4
2,756,215	+		Rru_A2365	0.52	+1.2
2,756,215	+		Rru_A2365	0.52	+2.0
2,756,215	+		Rru_A2365	0.52	-0.6
2,756,215	+		Rru_A2365	0.52	-0.3
2,756,216	-		Rru_A2365	0.52	+0.4
2,756,216	-		Rru_A2365	0.52	-1.1
2,756,216	-		Rru_A2365	0.52	-0.7
2,757,045	+		Rru_A2365	0.84	+0.2
2,757,045	+		Rru_A2365	0.84	+0.2
2,757,261	+				+0.8
2,757,262	-				+0.2
2,757,262	-				+0.0
2,757,262	-				-0.8
2,757,262	-				+1.8
2,757,357	-				+0.6
2,757,543	+				-0.5
2,757,543	+				-0.3
2,757,544	-				-3.2
2,757,553	+				+2.3
2,757,553	+				+0.4
2,757,554	-				-0.5
2,757,650	-				+0.8
2,757,650	-				-1.3
2,757,881	+		Rru_A2366	0.16	-0.4
2,757,882	-		Rru_A2366	0.16	-0.2
2,757,882	-		Rru_A2366	0.16	+0.3
2,757,882	-		Rru_A2366	0.16	+0.4
2,757,887	+		Rru_A2366	0.16	-0.3
2,757,887	+		Rru_A2366	0.16	+0.2
2,757,887	+		Rru_A2366	0.16	+0.7
2,757,887	+		Rru_A2366	0.16	+0.7
2,757,887	+		Rru_A2366	0.16	+1.8
2,757,887	+		Rru_A2366	0.16	-0.4
2,757,887	+		Rru_A2366	0.16	-0.2
2,757,887	+		Rru_A2366	0.16	-1.8
2,757,888	-		Rru_A2366	0.16	+0.7
2,757,888	-		Rru_A2366	0.16	-0.6
2,757,888	-		Rru_A2366	0.16	-4.8
2,757,888	-		Rru_A2366	0.16	-1.1
2,757,890	-		Rru_A2366	0.16	-0.6
2,757,890	-		Rru_A2366	0.16	-0.2
2,757,890	-		Rru_A2366	0.16	-0.6
2,757,893	+		Rru_A2366	0.17	+0.5
2,757,894	-		Rru_A2366	0.17	-1.0
2,757,894	-		Rru_A2366	0.17	-0.4
2,757,894	-		Rru_A2366	0.17	-3.6
2,757,894	-		Rru_A2366	0.17	+0.4
2,757,894	-		Rru_A2366	0.17	-0.3
2,757,894	-		Rru_A2366	0.17	-2.1
2,757,894	-		Rru_A2366	0.17	-1.1
2,757,900	-		Rru_A2366	0.17	-0.7
2,757,900	-		Rru_A2366	0.17	+0.1
2,757,950	+		Rru_A2366	0.20	+0.2
2,757,950	+		Rru_A2366	0.20	-0.4
2,757,950	+		Rru_A2366	0.20	+1.3
2,757,950	+		Rru_A2366	0.20	-0.6
2,757,950	+		Rru_A2366	0.20	-0.2
2,757,950	+		Rru_A2366	0.20	+0.2
2,757,950	+		Rru_A2366	0.20	-1.5
2,757,950	+		Rru_A2366	0.20	+0.1
2,757,950	+		Rru_A2366	0.20	+0.3
2,757,951	-		Rru_A2366	0.20	-1.3
2,757,951	-		Rru_A2366	0.20	-1.0
2,757,951	-		Rru_A2366	0.20	-2.8
2,757,951	-		Rru_A2366	0.20	-1.2
2,757,951	-		Rru_A2366	0.20	-1.6
2,757,951	-		Rru_A2366	0.20	+0.5
2,757,951	-		Rru_A2366	0.20	-0.0
2,757,953	-		Rru_A2366	0.20	+0.3
2,758,136	+		Rru_A2366	0.31	+0.5
2,758,136	+		Rru_A2366	0.31	+0.5
2,758,136	+		Rru_A2366	0.31	+1.1
2,758,137	-		Rru_A2366	0.31	-1.8
2,758,137	-		Rru_A2366	0.31	-1.4
2,758,137	-		Rru_A2366	0.31	-0.3
2,758,137	-		Rru_A2366	0.31	+0.4
2,758,139	-		Rru_A2366	0.31	-0.3
2,758,139	-		Rru_A2366	0.31	-0.2
2,758,139	-		Rru_A2366	0.31	-0.4
2,758,402	+		Rru_A2366	0.47	+0.5