Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04133 and SMc04132 are separated by 3 nucleotides SMc04132 and SMc04131 are separated by 10 nucleotides
SMc04133: SMc04133 - oxidoreductase, at 138,820 to 139,968
SMc04133
SMc04132: SMc04132 - hypothetical protein, at 139,972 to 141,135
SMc04132
SMc04131: SMc04131 - hypothetical protein, at 141,146 to 142,561
SMc04131
Position (kb)
139
140
141
142 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 139.011 kb on + strand, within SMc04133 at 139.012 kb on - strand, within SMc04133 at 139.012 kb on - strand, within SMc04133 at 139.012 kb on - strand, within SMc04133 at 139.142 kb on - strand, within SMc04133 at 139.436 kb on - strand, within SMc04133 at 139.436 kb on - strand, within SMc04133 at 139.529 kb on - strand, within SMc04133 at 139.593 kb on + strand, within SMc04133 at 139.594 kb on - strand, within SMc04133 at 139.762 kb on + strand, within SMc04133 at 140.015 kb on - strand at 140.023 kb on - strand at 140.217 kb on + strand, within SMc04132 at 140.383 kb on + strand, within SMc04132 at 140.384 kb on - strand, within SMc04132 at 140.479 kb on + strand, within SMc04132 at 140.479 kb on + strand, within SMc04132 at 140.479 kb on + strand, within SMc04132 at 140.480 kb on - strand, within SMc04132 at 140.480 kb on - strand, within SMc04132 at 140.480 kb on - strand, within SMc04132 at 140.480 kb on - strand, within SMc04132 at 140.491 kb on + strand, within SMc04132 at 140.491 kb on + strand, within SMc04132 at 140.492 kb on - strand, within SMc04132 at 140.492 kb on - strand, within SMc04132 at 140.492 kb on - strand, within SMc04132 at 140.726 kb on - strand, within SMc04132 at 140.746 kb on + strand, within SMc04132 at 140.747 kb on - strand, within SMc04132 at 140.747 kb on - strand, within SMc04132 at 140.936 kb on - strand, within SMc04132 at 140.976 kb on - strand, within SMc04132 at 140.976 kb on - strand, within SMc04132 at 141.522 kb on - strand, within SMc04131 at 141.547 kb on + strand, within SMc04131 at 141.747 kb on + strand, within SMc04131 at 141.809 kb on + strand, within SMc04131 at 141.911 kb on + strand, within SMc04131 at 141.911 kb on + strand, within SMc04131 at 141.911 kb on + strand, within SMc04131 at 141.912 kb on - strand, within SMc04131 at 141.912 kb on - strand, within SMc04131 at 141.913 kb on + strand, within SMc04131 at 141.914 kb on - strand, within SMc04131 at 141.914 kb on - strand, within SMc04131
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 139,011 + SMc04133 0.17 -0.1 139,012 - SMc04133 0.17 +1.2 139,012 - SMc04133 0.17 +0.5 139,012 - SMc04133 0.17 +0.1 139,142 - SMc04133 0.28 +1.4 139,436 - SMc04133 0.54 -1.2 139,436 - SMc04133 0.54 +0.2 139,529 - SMc04133 0.62 -1.2 139,593 + SMc04133 0.67 -0.4 139,594 - SMc04133 0.67 +0.2 139,762 + SMc04133 0.82 -0.1 140,015 - -1.5 140,023 - +0.2 140,217 + SMc04132 0.21 +0.1 140,383 + SMc04132 0.35 -0.3 140,384 - SMc04132 0.35 -0.2 140,479 + SMc04132 0.44 +1.5 140,479 + SMc04132 0.44 +1.7 140,479 + SMc04132 0.44 -0.1 140,480 - SMc04132 0.44 +0.7 140,480 - SMc04132 0.44 +1.3 140,480 - SMc04132 0.44 -2.5 140,480 - SMc04132 0.44 +1.6 140,491 + SMc04132 0.45 -1.3 140,491 + SMc04132 0.45 -1.8 140,492 - SMc04132 0.45 -0.3 140,492 - SMc04132 0.45 +0.9 140,492 - SMc04132 0.45 -1.2 140,726 - SMc04132 0.65 -0.1 140,746 + SMc04132 0.66 +1.3 140,747 - SMc04132 0.67 +0.1 140,747 - SMc04132 0.67 -1.5 140,936 - SMc04132 0.83 -1.6 140,976 - SMc04132 0.86 +0.9 140,976 - SMc04132 0.86 +0.5 141,522 - SMc04131 0.27 -0.1 141,547 + SMc04131 0.28 -0.7 141,747 + SMc04131 0.42 +2.1 141,809 + SMc04131 0.47 -2.3 141,911 + SMc04131 0.54 +0.4 141,911 + SMc04131 0.54 -2.2 141,911 + SMc04131 0.54 +0.3 141,912 - SMc04131 0.54 -1.9 141,912 - SMc04131 0.54 -3.5 141,913 + SMc04131 0.54 -0.9 141,914 - SMc04131 0.54 -1.9 141,914 - SMc04131 0.54 -4.1
Or see this region's nucleotide sequence