Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01668 and SMc01669 are separated by 84 nucleotides SMc01669 and SMc01670 are separated by 52 nucleotides SMc01670 and SMc01671 are separated by 49 nucleotides
SMc01668: SMc01668 - transcriptional regulator, at 2,471,522 to 2,472,118
SMc01668
SMc01669: SMc01669 - enoyl-CoA hydratase, at 2,472,203 to 2,472,994
SMc01669
SMc01670: SMc01670 - hypothetical protein, at 2,473,047 to 2,473,526
SMc01670
SMc01671: SMc01671 - hypothetical protein, at 2,473,576 to 2,474,889
SMc01671
Position (kb)
2473
2474 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2472.061 kb on - strand at 2472.128 kb on - strand at 2472.137 kb on - strand at 2472.167 kb on - strand at 2472.183 kb on + strand at 2472.183 kb on + strand at 2472.183 kb on + strand at 2472.183 kb on + strand at 2472.184 kb on - strand at 2472.184 kb on - strand at 2472.184 kb on - strand at 2472.184 kb on - strand at 2472.287 kb on + strand, within SMc01669 at 2472.287 kb on + strand, within SMc01669 at 2472.309 kb on + strand, within SMc01669 at 2472.537 kb on - strand, within SMc01669 at 2472.537 kb on - strand, within SMc01669 at 2472.980 kb on + strand at 2472.981 kb on - strand at 2473.048 kb on + strand at 2473.215 kb on + strand, within SMc01670 at 2473.215 kb on + strand, within SMc01670 at 2473.216 kb on - strand, within SMc01670 at 2473.216 kb on - strand, within SMc01670 at 2473.246 kb on + strand, within SMc01670 at 2473.246 kb on + strand, within SMc01670 at 2473.271 kb on + strand, within SMc01670 at 2473.273 kb on + strand, within SMc01670 at 2473.274 kb on - strand, within SMc01670 at 2473.316 kb on + strand, within SMc01670 at 2473.317 kb on - strand, within SMc01670 at 2473.317 kb on - strand, within SMc01670 at 2473.437 kb on + strand, within SMc01670 at 2473.437 kb on + strand, within SMc01670 at 2473.438 kb on - strand, within SMc01670 at 2473.556 kb on + strand at 2473.908 kb on + strand, within SMc01671 at 2474.037 kb on - strand, within SMc01671 at 2474.112 kb on - strand, within SMc01671 at 2474.261 kb on + strand, within SMc01671 at 2474.310 kb on - strand, within SMc01671 at 2474.310 kb on - strand, within SMc01671 at 2474.330 kb on + strand, within SMc01671 at 2474.330 kb on + strand, within SMc01671
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,472,061 - +0.3 2,472,128 - +0.7 2,472,137 - +0.2 2,472,167 - -0.1 2,472,183 + +0.1 2,472,183 + +1.2 2,472,183 + +0.4 2,472,183 + -1.8 2,472,184 - -1.3 2,472,184 - -2.0 2,472,184 - -3.6 2,472,184 - +0.6 2,472,287 + SMc01669 0.11 -1.9 2,472,287 + SMc01669 0.11 -0.2 2,472,309 + SMc01669 0.13 -0.3 2,472,537 - SMc01669 0.42 -2.5 2,472,537 - SMc01669 0.42 +2.9 2,472,980 + +0.3 2,472,981 - -0.3 2,473,048 + +0.0 2,473,215 + SMc01670 0.35 +0.7 2,473,215 + SMc01670 0.35 -1.5 2,473,216 - SMc01670 0.35 +0.5 2,473,216 - SMc01670 0.35 +0.1 2,473,246 + SMc01670 0.41 -1.9 2,473,246 + SMc01670 0.41 +0.3 2,473,271 + SMc01670 0.47 +0.4 2,473,273 + SMc01670 0.47 -0.2 2,473,274 - SMc01670 0.47 -0.1 2,473,316 + SMc01670 0.56 -1.2 2,473,317 - SMc01670 0.56 -1.6 2,473,317 - SMc01670 0.56 +0.5 2,473,437 + SMc01670 0.81 -1.7 2,473,437 + SMc01670 0.81 -0.4 2,473,438 - SMc01670 0.81 -0.2 2,473,556 + -0.2 2,473,908 + SMc01671 0.25 -0.6 2,474,037 - SMc01671 0.35 -2.4 2,474,112 - SMc01671 0.41 +0.3 2,474,261 + SMc01671 0.52 +0.5 2,474,310 - SMc01671 0.56 -2.4 2,474,310 - SMc01671 0.56 +0.2 2,474,330 + SMc01671 0.57 +1.2 2,474,330 + SMc01671 0.57 -0.9
Or see this region's nucleotide sequence