Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01662 and SMc01663 overlap by 4 nucleotides SMc01663 and SMc01664 are separated by 122 nucleotides
SMc01662: SMc01662 - oxidoreductase, at 2,461,617 to 2,464,064
SMc01662
SMc01663: SMc01663 - oxidoreductase, at 2,464,061 to 2,466,508
SMc01663
SMc01664: SMc01664 - transcriptional regulator, at 2,466,631 to 2,467,476
SMc01664
Position (kb)
2464
2465
2466
2467 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2463.061 kb on + strand, within SMc01662 at 2463.061 kb on + strand, within SMc01662 at 2463.289 kb on + strand, within SMc01662 at 2463.289 kb on + strand, within SMc01662 at 2463.289 kb on + strand, within SMc01662 at 2463.289 kb on + strand, within SMc01662 at 2463.289 kb on + strand, within SMc01662 at 2463.290 kb on - strand, within SMc01662 at 2463.292 kb on + strand, within SMc01662 at 2463.292 kb on + strand, within SMc01662 at 2463.292 kb on + strand, within SMc01662 at 2463.293 kb on - strand, within SMc01662 at 2463.361 kb on + strand, within SMc01662 at 2463.361 kb on + strand, within SMc01662 at 2463.362 kb on - strand, within SMc01662 at 2463.362 kb on - strand, within SMc01662 at 2463.362 kb on - strand, within SMc01662 at 2463.362 kb on - strand, within SMc01662 at 2463.362 kb on - strand, within SMc01662 at 2463.705 kb on + strand, within SMc01662 at 2463.705 kb on + strand, within SMc01662 at 2463.745 kb on + strand, within SMc01662 at 2463.857 kb on - strand at 2463.857 kb on - strand at 2463.991 kb on + strand at 2463.992 kb on - strand at 2464.118 kb on - strand at 2464.218 kb on + strand at 2464.218 kb on + strand at 2464.218 kb on + strand at 2464.281 kb on + strand at 2464.432 kb on - strand, within SMc01663 at 2464.464 kb on + strand, within SMc01663 at 2464.917 kb on + strand, within SMc01663 at 2465.146 kb on - strand, within SMc01663 at 2465.170 kb on + strand, within SMc01663 at 2465.172 kb on + strand, within SMc01663 at 2465.173 kb on - strand, within SMc01663 at 2465.251 kb on - strand, within SMc01663 at 2465.251 kb on - strand, within SMc01663 at 2465.251 kb on - strand, within SMc01663 at 2465.274 kb on + strand, within SMc01663 at 2465.274 kb on + strand, within SMc01663 at 2465.274 kb on + strand, within SMc01663 at 2465.274 kb on + strand, within SMc01663 at 2465.275 kb on - strand, within SMc01663 at 2465.275 kb on - strand, within SMc01663 at 2465.287 kb on - strand, within SMc01663 at 2465.313 kb on + strand, within SMc01663 at 2465.313 kb on + strand, within SMc01663 at 2465.314 kb on - strand, within SMc01663 at 2465.314 kb on - strand, within SMc01663 at 2465.327 kb on - strand, within SMc01663 at 2465.327 kb on - strand, within SMc01663 at 2465.327 kb on - strand, within SMc01663 at 2465.328 kb on + strand, within SMc01663 at 2465.329 kb on - strand, within SMc01663 at 2465.589 kb on + strand, within SMc01663 at 2465.691 kb on + strand, within SMc01663 at 2465.691 kb on + strand, within SMc01663 at 2465.731 kb on - strand, within SMc01663 at 2465.731 kb on - strand, within SMc01663 at 2465.731 kb on - strand, within SMc01663 at 2465.733 kb on + strand, within SMc01663 at 2465.733 kb on + strand, within SMc01663 at 2465.734 kb on - strand, within SMc01663 at 2465.734 kb on - strand, within SMc01663 at 2465.734 kb on - strand, within SMc01663 at 2465.734 kb on - strand, within SMc01663 at 2465.734 kb on - strand, within SMc01663 at 2465.823 kb on + strand, within SMc01663 at 2465.824 kb on - strand, within SMc01663 at 2465.824 kb on - strand, within SMc01663 at 2465.887 kb on - strand, within SMc01663 at 2465.887 kb on - strand, within SMc01663 at 2465.889 kb on + strand, within SMc01663 at 2465.890 kb on - strand, within SMc01663 at 2465.910 kb on + strand, within SMc01663 at 2465.911 kb on - strand, within SMc01663 at 2466.070 kb on - strand, within SMc01663 at 2466.078 kb on + strand, within SMc01663 at 2466.078 kb on + strand, within SMc01663 at 2466.168 kb on + strand, within SMc01663 at 2466.249 kb on + strand, within SMc01663 at 2466.249 kb on + strand, within SMc01663 at 2466.249 kb on + strand, within SMc01663 at 2466.250 kb on - strand, within SMc01663 at 2466.438 kb on + strand at 2466.438 kb on + strand at 2466.439 kb on - strand at 2466.439 kb on - strand at 2466.439 kb on - strand at 2466.994 kb on + strand, within SMc01664 at 2466.994 kb on + strand, within SMc01664 at 2466.994 kb on + strand, within SMc01664 at 2466.994 kb on + strand, within SMc01664 at 2466.995 kb on - strand, within SMc01664 at 2466.995 kb on - strand, within SMc01664 at 2466.995 kb on - strand, within SMc01664 at 2466.995 kb on - strand, within SMc01664 at 2466.997 kb on - strand, within SMc01664 at 2467.066 kb on + strand, within SMc01664 at 2467.066 kb on + strand, within SMc01664 at 2467.067 kb on - strand, within SMc01664 at 2467.096 kb on + strand, within SMc01664 at 2467.097 kb on - strand, within SMc01664 at 2467.174 kb on + strand, within SMc01664 at 2467.175 kb on - strand, within SMc01664 at 2467.177 kb on - strand, within SMc01664 at 2467.309 kb on + strand, within SMc01664 at 2467.310 kb on - strand, within SMc01664 at 2467.310 kb on - strand, within SMc01664 at 2467.460 kb on + strand at 2467.475 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,463,061 + SMc01662 0.59 -0.1 2,463,061 + SMc01662 0.59 -0.8 2,463,289 + SMc01662 0.68 -3.7 2,463,289 + SMc01662 0.68 +0.2 2,463,289 + SMc01662 0.68 -1.2 2,463,289 + SMc01662 0.68 +1.4 2,463,289 + SMc01662 0.68 -0.4 2,463,290 - SMc01662 0.68 +0.3 2,463,292 + SMc01662 0.68 -0.4 2,463,292 + SMc01662 0.68 -2.0 2,463,292 + SMc01662 0.68 -0.1 2,463,293 - SMc01662 0.68 -0.5 2,463,361 + SMc01662 0.71 +0.5 2,463,361 + SMc01662 0.71 +0.2 2,463,362 - SMc01662 0.71 +0.7 2,463,362 - SMc01662 0.71 +0.0 2,463,362 - SMc01662 0.71 +0.0 2,463,362 - SMc01662 0.71 +0.4 2,463,362 - SMc01662 0.71 +1.4 2,463,705 + SMc01662 0.85 -0.2 2,463,705 + SMc01662 0.85 -2.6 2,463,745 + SMc01662 0.87 -0.5 2,463,857 - +0.1 2,463,857 - -1.3 2,463,991 + -1.7 2,463,992 - +0.1 2,464,118 - +0.6 2,464,218 + -0.1 2,464,218 + -0.6 2,464,218 + -0.6 2,464,281 + -2.7 2,464,432 - SMc01663 0.15 -1.1 2,464,464 + SMc01663 0.16 +3.2 2,464,917 + SMc01663 0.35 -1.9 2,465,146 - SMc01663 0.44 -2.1 2,465,170 + SMc01663 0.45 +0.1 2,465,172 + SMc01663 0.45 +0.5 2,465,173 - SMc01663 0.45 -3.7 2,465,251 - SMc01663 0.49 +1.2 2,465,251 - SMc01663 0.49 -0.1 2,465,251 - SMc01663 0.49 -1.3 2,465,274 + SMc01663 0.50 +0.1 2,465,274 + SMc01663 0.50 -2.7 2,465,274 + SMc01663 0.50 -2.0 2,465,274 + SMc01663 0.50 +0.6 2,465,275 - SMc01663 0.50 +0.9 2,465,275 - SMc01663 0.50 -0.3 2,465,287 - SMc01663 0.50 +2.7 2,465,313 + SMc01663 0.51 -1.1 2,465,313 + SMc01663 0.51 +0.3 2,465,314 - SMc01663 0.51 -2.0 2,465,314 - SMc01663 0.51 -0.1 2,465,327 - SMc01663 0.52 -0.9 2,465,327 - SMc01663 0.52 +0.7 2,465,327 - SMc01663 0.52 +1.6 2,465,328 + SMc01663 0.52 +1.3 2,465,329 - SMc01663 0.52 -0.2 2,465,589 + SMc01663 0.62 -0.4 2,465,691 + SMc01663 0.67 -0.2 2,465,691 + SMc01663 0.67 +0.3 2,465,731 - SMc01663 0.68 +4.9 2,465,731 - SMc01663 0.68 +1.6 2,465,731 - SMc01663 0.68 -0.2 2,465,733 + SMc01663 0.68 -0.2 2,465,733 + SMc01663 0.68 +2.0 2,465,734 - SMc01663 0.68 -0.5 2,465,734 - SMc01663 0.68 -0.1 2,465,734 - SMc01663 0.68 +0.9 2,465,734 - SMc01663 0.68 -1.9 2,465,734 - SMc01663 0.68 +1.1 2,465,823 + SMc01663 0.72 +2.2 2,465,824 - SMc01663 0.72 +0.6 2,465,824 - SMc01663 0.72 -0.3 2,465,887 - SMc01663 0.75 +1.3 2,465,887 - SMc01663 0.75 +0.1 2,465,889 + SMc01663 0.75 -0.8 2,465,890 - SMc01663 0.75 +0.2 2,465,910 + SMc01663 0.76 +0.3 2,465,911 - SMc01663 0.76 -0.8 2,466,070 - SMc01663 0.82 -0.3 2,466,078 + SMc01663 0.82 -2.1 2,466,078 + SMc01663 0.82 -0.0 2,466,168 + SMc01663 0.86 +0.3 2,466,249 + SMc01663 0.89 +0.5 2,466,249 + SMc01663 0.89 +0.4 2,466,249 + SMc01663 0.89 +0.7 2,466,250 - SMc01663 0.89 +0.3 2,466,438 + -0.4 2,466,438 + +0.8 2,466,439 - +1.5 2,466,439 - +0.5 2,466,439 - -0.5 2,466,994 + SMc01664 0.43 +1.2 2,466,994 + SMc01664 0.43 +0.7 2,466,994 + SMc01664 0.43 +0.8 2,466,994 + SMc01664 0.43 +0.0 2,466,995 - SMc01664 0.43 -0.6 2,466,995 - SMc01664 0.43 +4.3 2,466,995 - SMc01664 0.43 -0.2 2,466,995 - SMc01664 0.43 +1.2 2,466,997 - SMc01664 0.43 +0.6 2,467,066 + SMc01664 0.51 -0.6 2,467,066 + SMc01664 0.51 -0.5 2,467,067 - SMc01664 0.52 -2.8 2,467,096 + SMc01664 0.55 -1.4 2,467,097 - SMc01664 0.55 -2.2 2,467,174 + SMc01664 0.64 -0.6 2,467,175 - SMc01664 0.64 +0.2 2,467,177 - SMc01664 0.65 +0.1 2,467,309 + SMc01664 0.80 -1.2 2,467,310 - SMc01664 0.80 -1.6 2,467,310 - SMc01664 0.80 +0.5 2,467,460 + -0.5 2,467,475 - +0.5
Or see this region's nucleotide sequence