Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01576 and SMc01579 are separated by 27 nucleotides SMc01579 and SMc01582 are separated by 208 nucleotides
SMc01576: SMc01576 - oxidoreductase, at 2,384,057 to 2,385,346
SMc01576
SMc01579: SMc01579 - hypothetical protein, at 2,385,374 to 2,386,090
SMc01579
SMc01582: SMc01582 - alcohol dehydrogenase, at 2,386,299 to 2,387,444
SMc01582
Position (kb)
2385
2386
2387 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2384.384 kb on + strand, within SMc01576 at 2384.384 kb on + strand, within SMc01576 at 2384.443 kb on + strand, within SMc01576 at 2384.443 kb on + strand, within SMc01576 at 2384.444 kb on - strand, within SMc01576 at 2384.444 kb on - strand, within SMc01576 at 2384.444 kb on - strand, within SMc01576 at 2384.444 kb on - strand, within SMc01576 at 2384.444 kb on - strand, within SMc01576 at 2384.444 kb on - strand, within SMc01576 at 2384.444 kb on - strand, within SMc01576 at 2384.444 kb on - strand, within SMc01576 at 2384.605 kb on - strand, within SMc01576 at 2384.811 kb on - strand, within SMc01576 at 2384.837 kb on + strand, within SMc01576 at 2385.050 kb on + strand, within SMc01576 at 2385.050 kb on + strand, within SMc01576 at 2385.050 kb on + strand, within SMc01576 at 2385.050 kb on + strand, within SMc01576 at 2385.052 kb on + strand, within SMc01576 at 2385.053 kb on - strand, within SMc01576 at 2385.053 kb on - strand, within SMc01576 at 2385.163 kb on + strand, within SMc01576 at 2385.240 kb on + strand at 2385.555 kb on + strand, within SMc01579 at 2386.154 kb on - strand at 2386.156 kb on + strand at 2386.401 kb on + strand at 2386.474 kb on + strand, within SMc01582 at 2386.481 kb on - strand, within SMc01582 at 2386.481 kb on - strand, within SMc01582 at 2386.514 kb on - strand, within SMc01582 at 2386.612 kb on + strand, within SMc01582 at 2386.613 kb on - strand, within SMc01582 at 2386.613 kb on - strand, within SMc01582 at 2386.613 kb on - strand, within SMc01582 at 2386.733 kb on + strand, within SMc01582 at 2386.733 kb on + strand, within SMc01582 at 2386.735 kb on + strand, within SMc01582 at 2386.736 kb on - strand, within SMc01582 at 2386.804 kb on + strand, within SMc01582 at 2386.804 kb on + strand, within SMc01582 at 2386.804 kb on + strand, within SMc01582 at 2386.804 kb on + strand, within SMc01582 at 2386.805 kb on - strand, within SMc01582 at 2386.805 kb on - strand, within SMc01582 at 2386.805 kb on - strand, within SMc01582 at 2386.820 kb on - strand, within SMc01582
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,384,384 + SMc01576 0.25 +2.5 2,384,384 + SMc01576 0.25 -0.7 2,384,443 + SMc01576 0.30 -2.0 2,384,443 + SMc01576 0.30 +0.1 2,384,444 - SMc01576 0.30 +0.1 2,384,444 - SMc01576 0.30 -0.6 2,384,444 - SMc01576 0.30 -1.0 2,384,444 - SMc01576 0.30 +0.7 2,384,444 - SMc01576 0.30 +1.1 2,384,444 - SMc01576 0.30 +0.7 2,384,444 - SMc01576 0.30 +2.4 2,384,444 - SMc01576 0.30 +0.0 2,384,605 - SMc01576 0.42 +0.4 2,384,811 - SMc01576 0.58 +0.0 2,384,837 + SMc01576 0.60 +3.8 2,385,050 + SMc01576 0.77 -2.0 2,385,050 + SMc01576 0.77 +0.9 2,385,050 + SMc01576 0.77 +0.4 2,385,050 + SMc01576 0.77 +0.8 2,385,052 + SMc01576 0.77 +1.4 2,385,053 - SMc01576 0.77 +0.6 2,385,053 - SMc01576 0.77 +1.1 2,385,163 + SMc01576 0.86 -0.7 2,385,240 + +0.0 2,385,555 + SMc01579 0.25 -1.2 2,386,154 - -2.0 2,386,156 + +2.8 2,386,401 + +0.5 2,386,474 + SMc01582 0.15 +0.5 2,386,481 - SMc01582 0.16 -2.7 2,386,481 - SMc01582 0.16 +0.0 2,386,514 - SMc01582 0.19 +0.6 2,386,612 + SMc01582 0.27 -1.6 2,386,613 - SMc01582 0.27 +0.5 2,386,613 - SMc01582 0.27 +0.1 2,386,613 - SMc01582 0.27 +0.5 2,386,733 + SMc01582 0.38 -2.9 2,386,733 + SMc01582 0.38 +1.5 2,386,735 + SMc01582 0.38 -0.4 2,386,736 - SMc01582 0.38 -1.2 2,386,804 + SMc01582 0.44 -0.1 2,386,804 + SMc01582 0.44 +1.3 2,386,804 + SMc01582 0.44 -2.3 2,386,804 + SMc01582 0.44 -0.1 2,386,805 - SMc01582 0.44 +1.4 2,386,805 - SMc01582 0.44 +1.1 2,386,805 - SMc01582 0.44 +0.1 2,386,820 - SMc01582 0.45 +0.2
Or see this region's nucleotide sequence