Strain Fitness in Sinorhizobium meliloti 1021 around SMc00870

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc00872 and SMc00871 are separated by 60 nucleotidesSMc00871 and SMc00870 are separated by 84 nucleotidesSMc00870 and SMc00869 are separated by 73 nucleotidesSMc00869 and SMc00868 are separated by 13 nucleotides SMc00872: SMc00872 - FOF1 ATP synthase, subunit I transmembrane protein, at 916,431 to 916,877 SMc00872 SMc00871: SMc00871 - F0F1 ATP synthase subunit A, at 916,938 to 917,690 SMc00871 SMc00870: SMc00870 - F0F1 ATP synthase subunit C, at 917,775 to 918,002 SMc00870 SMc00869: SMc00869 - F0F1 ATP synthase subunit B', at 918,076 to 918,690 SMc00869 SMc00868: SMc00868 - F0F1 ATP synthase subunit B, at 918,704 to 919,189 SMc00868 Position (kb) 917 918 919Strain fitness (log2 ratio) -1 0 1at 916.898 kb on + strandat 917.688 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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916,898 + +0.0
917,688 + +0.6

Or see this region's nucleotide sequence