Strain Fitness in Sinorhizobium meliloti 1021 around SMc00729

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMc00730 and SMc00729 are separated by 299 nucleotidesSMc00729 and SMc00728 are separated by 116 nucleotides SMc00730: SMc00730 - hypothetical protein, at 2,849,603 to 2,850,394 SMc00730 SMc00729: SMc00729 - electron transfer flavoprotein BETA-subunit BETA-ETF flavoprotein small subunit, at 2,850,694 to 2,851,443 SMc00729 SMc00728: SMc00728 - electron transfer flavoprotein alpha-subunit alpha-ETF flavoprotein, at 2,851,560 to 2,852,489 SMc00728 Position (kb) 2850 2851 2852Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2849.751 kb on + strand, within SMc00730at 2849.751 kb on + strand, within SMc00730at 2849.751 kb on + strand, within SMc00730at 2849.756 kb on + strandat 2849.756 kb on + strand, within SMc00730at 2849.756 kb on + strand, within SMc00730at 2849.757 kb on - strand, within SMc00730at 2849.757 kb on - strand, within SMc00730at 2849.757 kb on - strand, within SMc00730at 2849.757 kb on - strand, within SMc00730at 2849.757 kb on - strand, within SMc00730at 2849.759 kb on - strand, within SMc00730at 2849.759 kb on - strand, within SMc00730at 2849.781 kb on - strand, within SMc00730at 2849.837 kb on + strand, within SMc00730at 2849.837 kb on + strand, within SMc00730at 2849.838 kb on - strand, within SMc00730at 2849.838 kb on - strand, within SMc00730at 2849.948 kb on + strand, within SMc00730at 2849.948 kb on + strand, within SMc00730at 2849.949 kb on - strand, within SMc00730at 2849.949 kb on - strand, within SMc00730at 2849.949 kb on - strand, within SMc00730at 2849.949 kb on - strand, within SMc00730at 2850.530 kb on + strandat 2850.577 kb on + strandat 2850.651 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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2,849,751 + SMc00730 0.19 -0.7
2,849,751 + SMc00730 0.19 +0.3
2,849,751 + SMc00730 0.19 -1.2
2,849,756 + -1.0
2,849,756 + SMc00730 0.19 -0.7
2,849,756 + SMc00730 0.19 -3.0
2,849,757 - SMc00730 0.19 +0.1
2,849,757 - SMc00730 0.19 +1.7
2,849,757 - SMc00730 0.19 -1.2
2,849,757 - SMc00730 0.19 -0.7
2,849,757 - SMc00730 0.19 +1.5
2,849,759 - SMc00730 0.20 -0.5
2,849,759 - SMc00730 0.20 +2.4
2,849,781 - SMc00730 0.22 -0.3
2,849,837 + SMc00730 0.30 -2.4
2,849,837 + SMc00730 0.30 +1.3
2,849,838 - SMc00730 0.30 +1.4
2,849,838 - SMc00730 0.30 +1.4
2,849,948 + SMc00730 0.44 -2.4
2,849,948 + SMc00730 0.44 -0.3
2,849,949 - SMc00730 0.44 -1.2
2,849,949 - SMc00730 0.44 -0.0
2,849,949 - SMc00730 0.44 +0.7
2,849,949 - SMc00730 0.44 +1.2
2,850,530 + -1.6
2,850,577 + -3.5
2,850,651 + +0.9

Or see this region's nucleotide sequence