Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00138 and SMc00137 are separated by 171 nucleotides SMc00137 and SMc00136 are separated by 140 nucleotides SMc00136 and SMc00135 are separated by 119 nucleotides
SMc00138: SMc00138 - L-lysine ABC transporter, permease component 2 (from data) , at 2,032,383 to 2,033,213
SMc00138
SMc00137: SMc00137 - hypothetical protein, at 2,033,385 to 2,033,651
SMc00137
SMc00136: SMc00136 - oxidoreductase, at 2,033,792 to 2,034,496
SMc00136
SMc00135: SMc00135 - hypothetical protein, at 2,034,616 to 2,035,347
SMc00135
Position (kb)
2033
2034
2035 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2032.945 kb on + strand, within SMc00138 at 2032.946 kb on - strand, within SMc00138 at 2032.984 kb on + strand, within SMc00138 at 2033.115 kb on + strand, within SMc00138 at 2033.115 kb on + strand, within SMc00138 at 2033.115 kb on + strand, within SMc00138 at 2033.115 kb on + strand, within SMc00138 at 2033.115 kb on + strand, within SMc00138 at 2033.115 kb on + strand, within SMc00138 at 2033.115 kb on + strand, within SMc00138 at 2033.116 kb on - strand, within SMc00138 at 2033.116 kb on - strand, within SMc00138 at 2033.116 kb on - strand, within SMc00138 at 2033.118 kb on - strand, within SMc00138 at 2033.137 kb on - strand at 2033.137 kb on - strand at 2033.242 kb on + strand at 2033.290 kb on - strand at 2033.306 kb on + strand at 2033.319 kb on + strand at 2033.330 kb on + strand at 2033.352 kb on + strand at 2033.352 kb on + strand at 2033.353 kb on - strand at 2033.353 kb on - strand at 2033.418 kb on + strand, within SMc00137 at 2033.440 kb on + strand, within SMc00137 at 2033.441 kb on - strand, within SMc00137 at 2033.446 kb on - strand, within SMc00137 at 2033.481 kb on + strand, within SMc00137 at 2033.481 kb on + strand, within SMc00137 at 2033.481 kb on + strand, within SMc00137 at 2033.481 kb on + strand, within SMc00137 at 2033.481 kb on + strand, within SMc00137 at 2033.481 kb on + strand, within SMc00137 at 2033.482 kb on - strand, within SMc00137 at 2033.482 kb on - strand, within SMc00137 at 2033.482 kb on - strand, within SMc00137 at 2033.482 kb on - strand, within SMc00137 at 2033.482 kb on - strand, within SMc00137 at 2033.482 kb on - strand, within SMc00137 at 2033.482 kb on - strand, within SMc00137 at 2033.482 kb on - strand, within SMc00137 at 2033.496 kb on + strand, within SMc00137 at 2033.583 kb on + strand, within SMc00137 at 2033.584 kb on - strand, within SMc00137 at 2033.584 kb on - strand, within SMc00137 at 2033.584 kb on - strand, within SMc00137 at 2033.584 kb on - strand, within SMc00137 at 2033.842 kb on + strand at 2033.842 kb on + strand at 2033.843 kb on - strand at 2033.844 kb on + strand at 2033.845 kb on - strand at 2033.845 kb on - strand at 2033.845 kb on - strand at 2033.989 kb on + strand, within SMc00136 at 2034.093 kb on + strand, within SMc00136 at 2034.093 kb on + strand, within SMc00136 at 2034.093 kb on + strand, within SMc00136 at 2034.093 kb on + strand, within SMc00136 at 2034.094 kb on - strand, within SMc00136 at 2034.094 kb on - strand, within SMc00136 at 2034.103 kb on + strand, within SMc00136 at 2034.180 kb on + strand, within SMc00136 at 2034.180 kb on + strand, within SMc00136 at 2034.181 kb on - strand, within SMc00136 at 2034.181 kb on - strand, within SMc00136 at 2034.181 kb on - strand, within SMc00136 at 2034.412 kb on - strand, within SMc00136 at 2034.412 kb on - strand, within SMc00136 at 2034.678 kb on - strand at 2034.678 kb on - strand at 2034.692 kb on + strand, within SMc00135 at 2034.867 kb on - strand, within SMc00135 at 2034.867 kb on - strand, within SMc00135 at 2034.903 kb on - strand at 2034.998 kb on + strand, within SMc00135 at 2034.999 kb on - strand, within SMc00135 at 2035.189 kb on + strand, within SMc00135 at 2035.189 kb on + strand, within SMc00135 at 2035.233 kb on - strand, within SMc00135 at 2035.236 kb on - strand, within SMc00135 at 2035.236 kb on - strand, within SMc00135 at 2035.370 kb on + strand at 2035.400 kb on + strand at 2035.400 kb on + strand at 2035.400 kb on + strand at 2035.400 kb on + strand at 2035.400 kb on + strand at 2035.401 kb on - strand at 2035.401 kb on - strand at 2035.457 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 2,032,945 + SMc00138 0.68 -1.9 2,032,946 - SMc00138 0.68 +1.4 2,032,984 + SMc00138 0.72 -1.3 2,033,115 + SMc00138 0.88 +0.5 2,033,115 + SMc00138 0.88 +0.1 2,033,115 + SMc00138 0.88 -4.6 2,033,115 + SMc00138 0.88 +0.9 2,033,115 + SMc00138 0.88 -1.1 2,033,115 + SMc00138 0.88 -1.9 2,033,115 + SMc00138 0.88 -0.9 2,033,116 - SMc00138 0.88 +0.2 2,033,116 - SMc00138 0.88 +1.2 2,033,116 - SMc00138 0.88 -0.7 2,033,118 - SMc00138 0.88 +0.9 2,033,137 - +0.2 2,033,137 - -1.2 2,033,242 + +0.1 2,033,290 - -2.9 2,033,306 + -1.1 2,033,319 + -2.2 2,033,330 + -2.0 2,033,352 + +0.1 2,033,352 + -0.8 2,033,353 - -1.1 2,033,353 - +1.1 2,033,418 + SMc00137 0.12 -0.4 2,033,440 + SMc00137 0.21 -1.0 2,033,441 - SMc00137 0.21 -2.8 2,033,446 - SMc00137 0.23 +0.3 2,033,481 + SMc00137 0.36 +0.3 2,033,481 + SMc00137 0.36 -1.7 2,033,481 + SMc00137 0.36 -1.6 2,033,481 + SMc00137 0.36 +1.1 2,033,481 + SMc00137 0.36 -1.4 2,033,481 + SMc00137 0.36 +0.9 2,033,482 - SMc00137 0.36 +1.4 2,033,482 - SMc00137 0.36 -0.4 2,033,482 - SMc00137 0.36 -0.2 2,033,482 - SMc00137 0.36 +0.1 2,033,482 - SMc00137 0.36 -2.4 2,033,482 - SMc00137 0.36 +0.4 2,033,482 - SMc00137 0.36 +2.3 2,033,482 - SMc00137 0.36 +0.2 2,033,496 + SMc00137 0.42 +1.8 2,033,583 + SMc00137 0.74 -0.8 2,033,584 - SMc00137 0.75 -3.6 2,033,584 - SMc00137 0.75 +0.3 2,033,584 - SMc00137 0.75 -0.1 2,033,584 - SMc00137 0.75 -0.2 2,033,842 + +0.1 2,033,842 + +1.7 2,033,843 - +0.2 2,033,844 + -1.1 2,033,845 - -3.6 2,033,845 - -1.1 2,033,845 - +0.3 2,033,989 + SMc00136 0.28 -0.7 2,034,093 + SMc00136 0.43 +0.6 2,034,093 + SMc00136 0.43 -3.6 2,034,093 + SMc00136 0.43 -1.3 2,034,093 + SMc00136 0.43 -0.1 2,034,094 - SMc00136 0.43 -0.0 2,034,094 - SMc00136 0.43 -1.5 2,034,103 + SMc00136 0.44 +0.1 2,034,180 + SMc00136 0.55 -0.7 2,034,180 + SMc00136 0.55 -1.1 2,034,181 - SMc00136 0.55 -0.0 2,034,181 - SMc00136 0.55 -1.0 2,034,181 - SMc00136 0.55 -1.0 2,034,412 - SMc00136 0.88 -0.6 2,034,412 - SMc00136 0.88 -0.8 2,034,678 - -0.2 2,034,678 - +2.0 2,034,692 + SMc00135 0.10 +1.0 2,034,867 - SMc00135 0.34 -0.4 2,034,867 - SMc00135 0.34 -0.5 2,034,903 - +1.3 2,034,998 + SMc00135 0.52 +1.6 2,034,999 - SMc00135 0.52 +0.0 2,035,189 + SMc00135 0.78 +1.4 2,035,189 + SMc00135 0.78 -1.1 2,035,233 - SMc00135 0.84 -3.2 2,035,236 - SMc00135 0.85 +1.6 2,035,236 - SMc00135 0.85 -0.3 2,035,370 + +0.4 2,035,400 + +0.5 2,035,400 + -0.9 2,035,400 + +0.8 2,035,400 + -2.0 2,035,400 + -0.9 2,035,401 - +0.3 2,035,401 - +0.9 2,035,457 - -2.8
Or see this region's nucleotide sequence