Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2357 and SMa2359 are separated by 11 nucleotides
SMa2357: SMa2357 - guanylate cyclase, at 1,329,978 to 1,330,670
SMa2357
SMa2359: SMa2359 - hypothetical protein, at 1,330,682 to 1,331,458
SMa2359
Position (kb)
1329
1330
1331 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 1329.024 kb on + strand at 1329.024 kb on + strand at 1329.024 kb on + strand at 1329.025 kb on - strand at 1329.025 kb on - strand at 1329.025 kb on - strand at 1329.035 kb on - strand at 1329.049 kb on + strand at 1329.142 kb on + strand at 1329.143 kb on - strand at 1329.143 kb on - strand at 1329.143 kb on - strand at 1329.143 kb on - strand at 1329.187 kb on + strand at 1329.215 kb on + strand at 1329.215 kb on + strand at 1329.216 kb on - strand at 1329.216 kb on - strand at 1329.216 kb on - strand at 1329.217 kb on + strand at 1329.217 kb on + strand at 1329.217 kb on + strand at 1329.217 kb on + strand at 1329.218 kb on - strand at 1329.218 kb on - strand at 1329.232 kb on - strand at 1329.321 kb on + strand at 1329.345 kb on + strand at 1329.389 kb on + strand at 1329.390 kb on - strand at 1329.390 kb on - strand at 1329.390 kb on - strand at 1329.423 kb on + strand at 1329.423 kb on + strand at 1329.424 kb on - strand at 1329.477 kb on + strand at 1329.478 kb on - strand at 1329.583 kb on + strand at 1329.583 kb on + strand at 1329.584 kb on - strand at 1329.619 kb on - strand at 1329.656 kb on + strand at 1329.656 kb on + strand at 1329.679 kb on + strand at 1329.731 kb on + strand at 1329.734 kb on - strand at 1329.797 kb on + strand at 1329.798 kb on - strand at 1329.798 kb on - strand at 1329.800 kb on - strand at 1329.896 kb on - strand at 1329.983 kb on + strand at 1330.059 kb on - strand, within SMa2357 at 1330.215 kb on + strand, within SMa2357 at 1330.215 kb on + strand, within SMa2357 at 1330.259 kb on + strand, within SMa2357 at 1330.259 kb on + strand, within SMa2357 at 1330.260 kb on - strand, within SMa2357 at 1330.260 kb on - strand, within SMa2357 at 1330.260 kb on - strand, within SMa2357 at 1330.260 kb on - strand, within SMa2357 at 1330.499 kb on + strand, within SMa2357 at 1330.517 kb on + strand, within SMa2357 at 1330.623 kb on + strand at 1330.659 kb on + strand at 1330.696 kb on + strand at 1330.713 kb on + strand at 1330.714 kb on - strand at 1330.714 kb on - strand at 1330.840 kb on + strand, within SMa2359 at 1330.840 kb on + strand, within SMa2359 at 1330.840 kb on + strand, within SMa2359 at 1330.840 kb on + strand, within SMa2359 at 1330.840 kb on + strand, within SMa2359 at 1330.840 kb on + strand, within SMa2359 at 1330.841 kb on - strand, within SMa2359 at 1330.841 kb on - strand, within SMa2359 at 1330.841 kb on - strand, within SMa2359 at 1330.841 kb on - strand, within SMa2359 at 1330.841 kb on - strand, within SMa2359 at 1330.841 kb on - strand, within SMa2359 at 1330.841 kb on - strand, within SMa2359 at 1330.884 kb on - strand, within SMa2359 at 1331.112 kb on + strand, within SMa2359 at 1331.190 kb on - strand, within SMa2359 at 1331.268 kb on + strand, within SMa2359 at 1331.385 kb on + strand at 1331.473 kb on + strand at 1331.553 kb on - strand at 1331.610 kb on + strand at 1331.610 kb on + strand at 1331.611 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,329,024 + +1.7 1,329,024 + -2.0 1,329,024 + -2.5 1,329,025 - -1.3 1,329,025 - +1.1 1,329,025 - +0.6 1,329,035 - -0.1 1,329,049 + -1.9 1,329,142 + -0.2 1,329,143 - -0.8 1,329,143 - +0.9 1,329,143 - -3.0 1,329,143 - -1.3 1,329,187 + -0.1 1,329,215 + +2.0 1,329,215 + -2.0 1,329,216 - -1.7 1,329,216 - -0.9 1,329,216 - -0.4 1,329,217 + +2.8 1,329,217 + +0.6 1,329,217 + +0.1 1,329,217 + +0.1 1,329,218 - -1.9 1,329,218 - +0.2 1,329,232 - -0.1 1,329,321 + +0.5 1,329,345 + -2.9 1,329,389 + -1.9 1,329,390 - +0.2 1,329,390 - +0.5 1,329,390 - -1.9 1,329,423 + -1.3 1,329,423 + +0.2 1,329,424 - +1.4 1,329,477 + +0.7 1,329,478 - -0.7 1,329,583 + +0.4 1,329,583 + +0.6 1,329,584 - +0.1 1,329,619 - +0.3 1,329,656 + -0.1 1,329,656 + -1.4 1,329,679 + -1.8 1,329,731 + -0.3 1,329,734 - +0.0 1,329,797 + +0.2 1,329,798 - +0.2 1,329,798 - -1.3 1,329,800 - -3.1 1,329,896 - -1.0 1,329,983 + +0.1 1,330,059 - SMa2357 0.12 +0.5 1,330,215 + SMa2357 0.34 +1.3 1,330,215 + SMa2357 0.34 +0.8 1,330,259 + SMa2357 0.41 -0.9 1,330,259 + SMa2357 0.41 +0.9 1,330,260 - SMa2357 0.41 -0.5 1,330,260 - SMa2357 0.41 -0.0 1,330,260 - SMa2357 0.41 +2.0 1,330,260 - SMa2357 0.41 -3.4 1,330,499 + SMa2357 0.75 -0.7 1,330,517 + SMa2357 0.78 +0.6 1,330,623 + -0.3 1,330,659 + +0.5 1,330,696 + -1.4 1,330,713 + +6.3 1,330,714 - -0.2 1,330,714 - +0.3 1,330,840 + SMa2359 0.20 -0.4 1,330,840 + SMa2359 0.20 -0.7 1,330,840 + SMa2359 0.20 +0.8 1,330,840 + SMa2359 0.20 +1.9 1,330,840 + SMa2359 0.20 -0.4 1,330,840 + SMa2359 0.20 -1.3 1,330,841 - SMa2359 0.20 -0.2 1,330,841 - SMa2359 0.20 -0.1 1,330,841 - SMa2359 0.20 +0.0 1,330,841 - SMa2359 0.20 +1.6 1,330,841 - SMa2359 0.20 -0.3 1,330,841 - SMa2359 0.20 -1.6 1,330,841 - SMa2359 0.20 +1.0 1,330,884 - SMa2359 0.26 -0.1 1,331,112 + SMa2359 0.55 -0.6 1,331,190 - SMa2359 0.65 -0.3 1,331,268 + SMa2359 0.75 -0.5 1,331,385 + +0.9 1,331,473 + +0.3 1,331,553 - -0.4 1,331,610 + -1.7 1,331,610 + +1.4 1,331,611 - -0.4
Or see this region's nucleotide sequence