Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1913 and SMa1916 are separated by 159 nucleotides SMa1916 and SMa1917 are separated by 340 nucleotides
SMa1913: SMa1913 - Na+/H+ antiporter, at 1,087,882 to 1,089,270
SMa1913
SMa1916: SMa1916 - Permease, at 1,089,430 to 1,091,208
SMa1916
SMa1917: SMa1917 - hypothetical protein, at 1,091,549 to 1,091,971
SMa1917
Position (kb)
1089
1090
1091
1092 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1088.502 kb on - strand, within SMa1913 at 1088.621 kb on - strand, within SMa1913 at 1088.694 kb on - strand, within SMa1913 at 1088.726 kb on + strand, within SMa1913 at 1089.077 kb on + strand, within SMa1913 at 1089.078 kb on - strand, within SMa1913 at 1089.078 kb on - strand, within SMa1913 at 1089.335 kb on - strand at 1089.388 kb on + strand at 1089.431 kb on + strand at 1089.484 kb on - strand at 1089.552 kb on + strand at 1089.552 kb on + strand at 1089.632 kb on + strand, within SMa1916 at 1089.632 kb on + strand, within SMa1916 at 1089.633 kb on - strand, within SMa1916 at 1089.633 kb on - strand, within SMa1916 at 1089.792 kb on + strand, within SMa1916 at 1089.792 kb on + strand, within SMa1916 at 1089.793 kb on - strand, within SMa1916 at 1089.853 kb on + strand, within SMa1916 at 1089.861 kb on + strand, within SMa1916 at 1089.862 kb on - strand, within SMa1916 at 1089.881 kb on + strand, within SMa1916 at 1089.882 kb on - strand, within SMa1916 at 1089.958 kb on + strand, within SMa1916 at 1089.959 kb on - strand, within SMa1916 at 1089.959 kb on - strand, within SMa1916 at 1090.109 kb on - strand, within SMa1916 at 1090.264 kb on + strand, within SMa1916 at 1090.265 kb on - strand, within SMa1916 at 1090.265 kb on - strand, within SMa1916 at 1090.352 kb on - strand, within SMa1916 at 1090.353 kb on + strand, within SMa1916 at 1090.354 kb on - strand, within SMa1916 at 1090.354 kb on - strand, within SMa1916 at 1090.395 kb on + strand, within SMa1916 at 1090.556 kb on + strand, within SMa1916 at 1090.557 kb on - strand, within SMa1916 at 1090.557 kb on - strand, within SMa1916 at 1090.557 kb on - strand, within SMa1916 at 1090.587 kb on + strand, within SMa1916 at 1090.738 kb on - strand, within SMa1916 at 1090.738 kb on - strand, within SMa1916 at 1090.738 kb on - strand, within SMa1916 at 1090.777 kb on + strand, within SMa1916 at 1090.800 kb on + strand, within SMa1916 at 1090.923 kb on + strand, within SMa1916 at 1090.924 kb on - strand, within SMa1916 at 1090.982 kb on - strand, within SMa1916 at 1091.069 kb on - strand at 1091.074 kb on + strand at 1091.074 kb on - strand at 1091.074 kb on - strand at 1091.149 kb on + strand at 1091.213 kb on - strand at 1091.213 kb on - strand at 1091.276 kb on + strand at 1091.370 kb on + strand at 1091.371 kb on - strand at 1091.462 kb on + strand at 1091.463 kb on - strand at 1091.463 kb on - strand at 1091.464 kb on + strand at 1091.465 kb on - strand at 1091.620 kb on + strand, within SMa1917 at 1091.621 kb on - strand, within SMa1917 at 1091.662 kb on - strand, within SMa1917 at 1091.786 kb on - strand, within SMa1917 at 1091.786 kb on - strand, within SMa1917 at 1091.788 kb on + strand, within SMa1917 at 1091.788 kb on + strand, within SMa1917 at 1091.854 kb on - strand, within SMa1917 at 1092.159 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,088,502 - SMa1913 0.45 +0.5 1,088,621 - SMa1913 0.53 -1.7 1,088,694 - SMa1913 0.58 +0.2 1,088,726 + SMa1913 0.61 -2.2 1,089,077 + SMa1913 0.86 +1.2 1,089,078 - SMa1913 0.86 +0.5 1,089,078 - SMa1913 0.86 -2.9 1,089,335 - -0.0 1,089,388 + -0.7 1,089,431 + -1.5 1,089,484 - -0.2 1,089,552 + -0.1 1,089,552 + +2.4 1,089,632 + SMa1916 0.11 -3.5 1,089,632 + SMa1916 0.11 -2.0 1,089,633 - SMa1916 0.11 +0.3 1,089,633 - SMa1916 0.11 +0.3 1,089,792 + SMa1916 0.20 +1.2 1,089,792 + SMa1916 0.20 +0.6 1,089,793 - SMa1916 0.20 -3.6 1,089,853 + SMa1916 0.24 -0.7 1,089,861 + SMa1916 0.24 -1.6 1,089,862 - SMa1916 0.24 +1.1 1,089,881 + SMa1916 0.25 +2.0 1,089,882 - SMa1916 0.25 +0.5 1,089,958 + SMa1916 0.30 -2.9 1,089,959 - SMa1916 0.30 -0.7 1,089,959 - SMa1916 0.30 -4.3 1,090,109 - SMa1916 0.38 -0.1 1,090,264 + SMa1916 0.47 -0.6 1,090,265 - SMa1916 0.47 -0.1 1,090,265 - SMa1916 0.47 +0.1 1,090,352 - SMa1916 0.52 +0.1 1,090,353 + SMa1916 0.52 +0.4 1,090,354 - SMa1916 0.52 +0.2 1,090,354 - SMa1916 0.52 -0.6 1,090,395 + SMa1916 0.54 +0.3 1,090,556 + SMa1916 0.63 -0.2 1,090,557 - SMa1916 0.63 -4.0 1,090,557 - SMa1916 0.63 -0.0 1,090,557 - SMa1916 0.63 -1.3 1,090,587 + SMa1916 0.65 +0.9 1,090,738 - SMa1916 0.74 -1.5 1,090,738 - SMa1916 0.74 +0.7 1,090,738 - SMa1916 0.74 +0.7 1,090,777 + SMa1916 0.76 -0.7 1,090,800 + SMa1916 0.77 -1.0 1,090,923 + SMa1916 0.84 +1.5 1,090,924 - SMa1916 0.84 +1.0 1,090,982 - SMa1916 0.87 -1.5 1,091,069 - +0.1 1,091,074 + +0.8 1,091,074 - -3.2 1,091,074 - -0.4 1,091,149 + -0.6 1,091,213 - -0.5 1,091,213 - -0.2 1,091,276 + +0.7 1,091,370 + +0.8 1,091,371 - -0.2 1,091,462 + +2.3 1,091,463 - +0.7 1,091,463 - +0.9 1,091,464 + +1.0 1,091,465 - +1.8 1,091,620 + SMa1917 0.17 -0.1 1,091,621 - SMa1917 0.17 -0.5 1,091,662 - SMa1917 0.27 -3.1 1,091,786 - SMa1917 0.56 -0.3 1,091,786 - SMa1917 0.56 +0.5 1,091,788 + SMa1917 0.57 -1.7 1,091,788 + SMa1917 0.57 +0.7 1,091,854 - SMa1917 0.72 +0.3 1,092,159 + +0.3
Or see this region's nucleotide sequence