Strain Fitness in Sinorhizobium meliloti 1021 around SMa0922

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntSMa5006 and SMa0922 are separated by 619 nucleotides SMa5006: SMa5006 - hypothetical protein, at 510,778 to 511,137 SMa5006 SMa0922: SMa0922 - hypothetical protein, at 511,757 to 512,080 SMa0922 Position (kb) 511 512 513Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 510.912 kb on + strand, within SMa5006at 510.914 kb on + strand, within SMa5006at 510.914 kb on + strand, within SMa5006at 510.914 kb on + strand, within SMa5006at 510.914 kb on + strand, within SMa5006at 510.914 kb on + strand, within SMa5006at 510.914 kb on + strand, within SMa5006at 510.915 kb on - strand, within SMa5006at 510.915 kb on - strand, within SMa5006at 510.964 kb on - strand, within SMa5006at 510.966 kb on + strand, within SMa5006at 510.966 kb on + strand, within SMa5006at 510.967 kb on - strand, within SMa5006at 510.990 kb on + strand, within SMa5006at 510.991 kb on - strand, within SMa5006at 511.007 kb on - strand, within SMa5006at 511.093 kb on + strand, within SMa5006at 511.298 kb on + strandat 511.299 kb on - strandat 511.331 kb on + strandat 511.497 kb on + strandat 511.498 kb on - strandat 511.544 kb on + strandat 511.545 kb on - strandat 511.545 kb on - strandat 511.556 kb on - strandat 511.557 kb on + strandat 511.596 kb on + strandat 511.890 kb on - strand, within SMa0922at 511.967 kb on + strand, within SMa0922at 511.967 kb on + strand, within SMa0922at 511.967 kb on + strand, within SMa0922at 511.968 kb on - strand, within SMa0922at 512.820 kb on - strandat 512.832 kb on + strandat 512.832 kb on + strandat 512.873 kb on + strandat 512.873 kb on + strandat 512.873 kb on + strandat 512.874 kb on - strandat 512.903 kb on - strandat 512.904 kb on + strandat 512.905 kb on - strandat 512.905 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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510,912 + SMa5006 0.37 +1.4
510,914 + SMa5006 0.38 +0.7
510,914 + SMa5006 0.38 +0.7
510,914 + SMa5006 0.38 +0.7
510,914 + SMa5006 0.38 -0.8
510,914 + SMa5006 0.38 -0.3
510,914 + SMa5006 0.38 -0.2
510,915 - SMa5006 0.38 +0.2
510,915 - SMa5006 0.38 +2.7
510,964 - SMa5006 0.52 -1.0
510,966 + SMa5006 0.52 -0.6
510,966 + SMa5006 0.52 +0.6
510,967 - SMa5006 0.53 +0.2
510,990 + SMa5006 0.59 +0.1
510,991 - SMa5006 0.59 -1.0
511,007 - SMa5006 0.64 -3.0
511,093 + SMa5006 0.88 -0.7
511,298 + -0.2
511,299 - +1.7
511,331 + -1.8
511,497 + +1.1
511,498 - +0.2
511,544 + -2.5
511,545 - -0.2
511,545 - +0.0
511,556 - +0.1
511,557 + -0.2
511,596 + +0.2
511,890 - SMa0922 0.41 -0.7
511,967 + SMa0922 0.65 -0.9
511,967 + SMa0922 0.65 -4.5
511,967 + SMa0922 0.65 -1.1
511,968 - SMa0922 0.65 -0.2
512,820 - -0.3
512,832 + +0.1
512,832 + +1.3
512,873 + -0.9
512,873 + -4.2
512,873 + +0.7
512,874 - -2.5
512,903 - -1.0
512,904 + -0.2
512,905 - -0.2
512,905 - -2.5

Or see this region's nucleotide sequence