Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0214 and SMa0216 are separated by 31 nucleotides SMa0216 and SMa0217 overlap by 4 nucleotides
SMa0214: SMa0214 - 5-keto-4-deoxyuronate isomerase, at 116,673 to 117,515
SMa0214
SMa0216: SMa0216 - ABC transporter ATP-binding protein, at 117,547 to 118,287
SMa0216
SMa0217: SMa0217 - ABC transporter permease, at 118,284 to 119,363
SMa0217
Position (kb) 117
118
119 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 116.604 kb on + strand at 116.605 kb on - strand at 116.670 kb on + strand at 116.670 kb on + strand at 116.670 kb on + strand at 116.670 kb on + strand at 116.675 kb on - strand at 116.890 kb on + strand, within SMa0214 at 116.896 kb on + strand at 116.896 kb on + strand, within SMa0214 at 117.013 kb on + strand, within SMa0214 at 117.014 kb on - strand, within SMa0214 at 117.130 kb on + strand, within SMa0214 at 117.130 kb on + strand, within SMa0214 at 117.130 kb on + strand, within SMa0214 at 117.264 kb on - strand, within SMa0214 at 117.387 kb on - strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.388 kb on + strand, within SMa0214 at 117.389 kb on - strand, within SMa0214 at 117.389 kb on - strand, within SMa0214 at 117.389 kb on - strand, within SMa0214 at 117.389 kb on - strand, within SMa0214 at 117.486 kb on + strand at 117.487 kb on - strand at 117.487 kb on - strand at 117.509 kb on + strand at 117.509 kb on + strand at 117.510 kb on - strand at 117.510 kb on - strand at 117.589 kb on - strand at 117.657 kb on - strand, within SMa0216 at 117.748 kb on + strand, within SMa0216 at 117.748 kb on + strand, within SMa0216 at 117.801 kb on - strand, within SMa0216 at 117.939 kb on + strand, within SMa0216 at 117.982 kb on - strand, within SMa0216 at 118.017 kb on + strand, within SMa0216 at 118.018 kb on - strand, within SMa0216 at 118.025 kb on + strand, within SMa0216 at 118.025 kb on + strand, within SMa0216 at 118.025 kb on + strand, within SMa0216 at 118.026 kb on - strand, within SMa0216 at 118.100 kb on + strand, within SMa0216 at 118.254 kb on + strand at 118.255 kb on - strand at 118.309 kb on - strand at 118.619 kb on + strand, within SMa0217 at 118.825 kb on + strand, within SMa0217 at 118.825 kb on + strand, within SMa0217 at 118.826 kb on - strand, within SMa0217 at 118.904 kb on + strand, within SMa0217 at 118.905 kb on - strand, within SMa0217 at 118.905 kb on - strand, within SMa0217 at 119.017 kb on + strand, within SMa0217 at 119.017 kb on + strand, within SMa0217 at 119.017 kb on + strand, within SMa0217 at 119.017 kb on + strand, within SMa0217
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 116,604 + -3.6 116,605 - -0.5 116,670 + +1.9 116,670 + -0.1 116,670 + -0.1 116,670 + +0.4 116,675 - +1.5 116,890 + SMa0214 0.26 -0.7 116,896 + +0.3 116,896 + SMa0214 0.26 -0.4 117,013 + SMa0214 0.40 -4.6 117,014 - SMa0214 0.40 +0.6 117,130 + SMa0214 0.54 -0.2 117,130 + SMa0214 0.54 -0.5 117,130 + SMa0214 0.54 +1.7 117,264 - SMa0214 0.70 -0.6 117,387 - SMa0214 0.85 +0.5 117,388 + SMa0214 0.85 -0.2 117,388 + SMa0214 0.85 -0.4 117,388 + SMa0214 0.85 +0.4 117,388 + SMa0214 0.85 -0.4 117,388 + SMa0214 0.85 -1.6 117,388 + SMa0214 0.85 +0.1 117,388 + SMa0214 0.85 -2.4 117,389 - SMa0214 0.85 -0.8 117,389 - SMa0214 0.85 +1.2 117,389 - SMa0214 0.85 -3.5 117,389 - SMa0214 0.85 -0.9 117,486 + +0.7 117,487 - +1.2 117,487 - -1.6 117,509 + -2.2 117,509 + +0.9 117,510 - +0.2 117,510 - +1.3 117,589 - +1.0 117,657 - SMa0216 0.15 +0.1 117,748 + SMa0216 0.27 +0.1 117,748 + SMa0216 0.27 +1.9 117,801 - SMa0216 0.34 -0.3 117,939 + SMa0216 0.53 -0.9 117,982 - SMa0216 0.59 +2.3 118,017 + SMa0216 0.63 -1.0 118,018 - SMa0216 0.64 -2.7 118,025 + SMa0216 0.65 +0.4 118,025 + SMa0216 0.65 -1.6 118,025 + SMa0216 0.65 -1.6 118,026 - SMa0216 0.65 -2.0 118,100 + SMa0216 0.75 -0.0 118,254 + -2.8 118,255 - -0.5 118,309 - -0.1 118,619 + SMa0217 0.31 +0.1 118,825 + SMa0217 0.50 -0.2 118,825 + SMa0217 0.50 -2.5 118,826 - SMa0217 0.50 -0.9 118,904 + SMa0217 0.57 -0.4 118,905 - SMa0217 0.57 +1.0 118,905 - SMa0217 0.57 +0.3 119,017 + SMa0217 0.68 -1.1 119,017 + SMa0217 0.68 -0.3 119,017 + SMa0217 0.68 -3.0 119,017 + SMa0217 0.68 -2.5
Or see this region's nucleotide sequence