Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21536 and SM_b21537 are separated by 146 nucleotides SM_b21537 and SM_b21538 are separated by 27 nucleotides
SM_b21536: SM_b21536 - hypothetical protein, at 1,064,008 to 1,065,678
_b21536
SM_b21537: SM_b21537 - 2-aminoethylphosphonate--pyruvate transaminase, at 1,065,825 to 1,066,976
_b21537
SM_b21538: SM_b21538 - phosphonoacetate hydrolase, at 1,067,004 to 1,068,278
_b21538
Position (kb)
1065
1066
1067 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 1064.920 kb on - strand, within SM_b21536 at 1064.920 kb on - strand, within SM_b21536 at 1064.942 kb on + strand, within SM_b21536 at 1065.151 kb on + strand, within SM_b21536 at 1065.151 kb on + strand, within SM_b21536 at 1065.152 kb on - strand, within SM_b21536 at 1065.185 kb on - strand, within SM_b21536 at 1065.837 kb on + strand at 1065.837 kb on + strand at 1065.987 kb on + strand, within SM_b21537 at 1065.987 kb on + strand, within SM_b21537 at 1065.987 kb on + strand, within SM_b21537 at 1065.988 kb on - strand, within SM_b21537 at 1066.092 kb on + strand, within SM_b21537 at 1066.092 kb on + strand, within SM_b21537 at 1066.092 kb on + strand, within SM_b21537 at 1066.123 kb on - strand, within SM_b21537 at 1066.161 kb on + strand, within SM_b21537 at 1066.161 kb on + strand, within SM_b21537 at 1066.162 kb on - strand, within SM_b21537 at 1066.162 kb on - strand, within SM_b21537 at 1066.162 kb on - strand, within SM_b21537 at 1066.162 kb on - strand, within SM_b21537 at 1066.162 kb on - strand, within SM_b21537 at 1066.162 kb on - strand, within SM_b21537 at 1066.163 kb on + strand, within SM_b21537 at 1066.164 kb on - strand, within SM_b21537 at 1066.164 kb on - strand, within SM_b21537 at 1066.164 kb on - strand, within SM_b21537 at 1066.164 kb on - strand, within SM_b21537 at 1066.164 kb on - strand, within SM_b21537 at 1066.164 kb on - strand, within SM_b21537 at 1066.293 kb on + strand, within SM_b21537 at 1066.294 kb on - strand, within SM_b21537 at 1066.294 kb on - strand, within SM_b21537 at 1066.512 kb on + strand, within SM_b21537 at 1066.512 kb on + strand, within SM_b21537 at 1066.512 kb on + strand, within SM_b21537 at 1066.513 kb on - strand, within SM_b21537 at 1066.542 kb on - strand, within SM_b21537 at 1066.542 kb on - strand, within SM_b21537 at 1066.542 kb on - strand, within SM_b21537 at 1066.767 kb on + strand, within SM_b21537 at 1066.768 kb on - strand, within SM_b21537 at 1066.768 kb on - strand, within SM_b21537 at 1066.768 kb on - strand, within SM_b21537 at 1066.800 kb on + strand, within SM_b21537 at 1066.800 kb on + strand, within SM_b21537 at 1067.107 kb on - strand at 1067.272 kb on - strand, within SM_b21538 at 1067.272 kb on - strand, within SM_b21538 at 1067.355 kb on + strand, within SM_b21538 at 1067.356 kb on - strand, within SM_b21538 at 1067.545 kb on - strand, within SM_b21538 at 1067.619 kb on + strand, within SM_b21538 at 1067.620 kb on - strand, within SM_b21538 at 1067.620 kb on - strand, within SM_b21538 at 1067.620 kb on - strand, within SM_b21538 at 1067.637 kb on + strand, within SM_b21538 at 1067.637 kb on + strand, within SM_b21538 at 1067.637 kb on + strand, within SM_b21538 at 1067.652 kb on + strand, within SM_b21538 at 1067.653 kb on - strand, within SM_b21538 at 1067.653 kb on - strand, within SM_b21538 at 1067.653 kb on - strand, within SM_b21538 at 1067.653 kb on - strand, within SM_b21538 at 1067.802 kb on + strand, within SM_b21538 at 1067.802 kb on + strand, within SM_b21538 at 1067.803 kb on - strand, within SM_b21538 at 1067.803 kb on - strand, within SM_b21538 at 1067.874 kb on + strand, within SM_b21538 at 1067.874 kb on + strand, within SM_b21538 at 1067.874 kb on + strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.875 kb on - strand, within SM_b21538 at 1067.916 kb on + strand, within SM_b21538
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,064,920 - SM_b21536 0.55 +1.7 1,064,920 - SM_b21536 0.55 -1.3 1,064,942 + SM_b21536 0.56 -0.2 1,065,151 + SM_b21536 0.68 -2.9 1,065,151 + SM_b21536 0.68 +0.0 1,065,152 - SM_b21536 0.68 -2.7 1,065,185 - SM_b21536 0.70 +0.4 1,065,837 + +0.6 1,065,837 + -1.2 1,065,987 + SM_b21537 0.14 -2.7 1,065,987 + SM_b21537 0.14 +1.0 1,065,987 + SM_b21537 0.14 +0.6 1,065,988 - SM_b21537 0.14 +0.2 1,066,092 + SM_b21537 0.23 -1.5 1,066,092 + SM_b21537 0.23 +0.1 1,066,092 + SM_b21537 0.23 -1.4 1,066,123 - SM_b21537 0.26 +0.5 1,066,161 + SM_b21537 0.29 -0.5 1,066,161 + SM_b21537 0.29 +0.8 1,066,162 - SM_b21537 0.29 +0.2 1,066,162 - SM_b21537 0.29 -0.9 1,066,162 - SM_b21537 0.29 +2.9 1,066,162 - SM_b21537 0.29 +2.0 1,066,162 - SM_b21537 0.29 -0.8 1,066,162 - SM_b21537 0.29 -0.8 1,066,163 + SM_b21537 0.29 -3.2 1,066,164 - SM_b21537 0.29 +0.1 1,066,164 - SM_b21537 0.29 +0.1 1,066,164 - SM_b21537 0.29 +0.9 1,066,164 - SM_b21537 0.29 +0.9 1,066,164 - SM_b21537 0.29 +0.5 1,066,164 - SM_b21537 0.29 +0.5 1,066,293 + SM_b21537 0.41 -1.0 1,066,294 - SM_b21537 0.41 +0.3 1,066,294 - SM_b21537 0.41 +0.5 1,066,512 + SM_b21537 0.60 -0.0 1,066,512 + SM_b21537 0.60 -1.8 1,066,512 + SM_b21537 0.60 -0.2 1,066,513 - SM_b21537 0.60 +1.5 1,066,542 - SM_b21537 0.62 +0.1 1,066,542 - SM_b21537 0.62 +0.4 1,066,542 - SM_b21537 0.62 -1.0 1,066,767 + SM_b21537 0.82 +0.9 1,066,768 - SM_b21537 0.82 +2.5 1,066,768 - SM_b21537 0.82 +0.2 1,066,768 - SM_b21537 0.82 -3.3 1,066,800 + SM_b21537 0.85 -0.9 1,066,800 + SM_b21537 0.85 -0.3 1,067,107 - -0.9 1,067,272 - SM_b21538 0.21 -2.7 1,067,272 - SM_b21538 0.21 +0.6 1,067,355 + SM_b21538 0.28 +0.2 1,067,356 - SM_b21538 0.28 -0.2 1,067,545 - SM_b21538 0.42 +1.5 1,067,619 + SM_b21538 0.48 +0.8 1,067,620 - SM_b21538 0.48 -0.5 1,067,620 - SM_b21538 0.48 +0.7 1,067,620 - SM_b21538 0.48 -0.2 1,067,637 + SM_b21538 0.50 -0.3 1,067,637 + SM_b21538 0.50 -0.7 1,067,637 + SM_b21538 0.50 +2.2 1,067,652 + SM_b21538 0.51 +1.5 1,067,653 - SM_b21538 0.51 +0.9 1,067,653 - SM_b21538 0.51 -0.9 1,067,653 - SM_b21538 0.51 +0.7 1,067,653 - SM_b21538 0.51 +0.8 1,067,802 + SM_b21538 0.63 +3.7 1,067,802 + SM_b21538 0.63 -0.4 1,067,803 - SM_b21538 0.63 +0.8 1,067,803 - SM_b21538 0.63 +0.5 1,067,874 + SM_b21538 0.68 +0.1 1,067,874 + SM_b21538 0.68 -0.6 1,067,874 + SM_b21538 0.68 +0.2 1,067,875 - SM_b21538 0.68 -0.6 1,067,875 - SM_b21538 0.68 -5.4 1,067,875 - SM_b21538 0.68 -0.2 1,067,875 - SM_b21538 0.68 +2.1 1,067,875 - SM_b21538 0.68 -0.1 1,067,916 + SM_b21538 0.72 +2.0
Or see this region's nucleotide sequence