Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20656 and SM_b20657 are separated by 38 nucleotides SM_b20657 and SM_b20658 are separated by 7 nucleotides SM_b20658 and SM_b20659 are separated by 14 nucleotides
SM_b20656: SM_b20656 - oxidoreductase, at 1,457,321 to 1,458,190
_b20656
SM_b20657: SM_b20657 - hypothetical protein, at 1,458,229 to 1,458,885
_b20657
SM_b20658: SM_b20658 - sugar uptake ABC transporter permease, at 1,458,893 to 1,459,792
_b20658
SM_b20659: SM_b20659 - sugar uptake ABC transporter permease, at 1,459,807 to 1,460,739
_b20659
Position (kb)
1458
1459
1460 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1458.105 kb on + strand at 1458.173 kb on + strand at 1458.174 kb on - strand at 1458.247 kb on + strand at 1458.466 kb on + strand, within SM_b20657 at 1458.477 kb on + strand, within SM_b20657 at 1458.477 kb on + strand, within SM_b20657 at 1458.478 kb on - strand, within SM_b20657 at 1458.927 kb on + strand at 1458.927 kb on + strand at 1458.928 kb on - strand at 1458.928 kb on - strand at 1458.928 kb on - strand at 1458.928 kb on - strand at 1458.930 kb on + strand at 1458.931 kb on - strand at 1458.931 kb on - strand at 1458.948 kb on + strand at 1458.949 kb on - strand at 1458.949 kb on - strand at 1459.089 kb on + strand, within SM_b20658 at 1459.245 kb on + strand, within SM_b20658 at 1459.246 kb on - strand, within SM_b20658 at 1459.275 kb on - strand, within SM_b20658 at 1459.291 kb on - strand, within SM_b20658 at 1459.320 kb on + strand, within SM_b20658 at 1459.383 kb on + strand, within SM_b20658 at 1459.446 kb on + strand, within SM_b20658 at 1459.447 kb on - strand, within SM_b20658 at 1459.447 kb on - strand, within SM_b20658 at 1459.447 kb on - strand, within SM_b20658 at 1459.490 kb on + strand, within SM_b20658 at 1459.527 kb on + strand, within SM_b20658 at 1459.528 kb on - strand, within SM_b20658 at 1459.548 kb on + strand, within SM_b20658 at 1459.548 kb on + strand, within SM_b20658 at 1459.548 kb on + strand, within SM_b20658 at 1459.592 kb on - strand, within SM_b20658 at 1459.593 kb on + strand, within SM_b20658 at 1459.593 kb on + strand, within SM_b20658 at 1459.594 kb on - strand, within SM_b20658 at 1459.594 kb on - strand, within SM_b20658 at 1459.594 kb on - strand, within SM_b20658 at 1459.603 kb on - strand, within SM_b20658 at 1459.650 kb on + strand, within SM_b20658 at 1459.667 kb on + strand, within SM_b20658 at 1459.668 kb on - strand, within SM_b20658 at 1459.668 kb on - strand, within SM_b20658 at 1459.695 kb on + strand, within SM_b20658 at 1459.696 kb on - strand, within SM_b20658 at 1459.696 kb on - strand, within SM_b20658 at 1459.696 kb on - strand, within SM_b20658 at 1459.731 kb on + strand at 1459.732 kb on - strand at 1459.732 kb on - strand at 1460.004 kb on - strand, within SM_b20659 at 1460.004 kb on - strand, within SM_b20659 at 1460.004 kb on - strand, within SM_b20659 at 1460.090 kb on + strand, within SM_b20659 at 1460.475 kb on - strand, within SM_b20659 at 1460.480 kb on + strand, within SM_b20659 at 1460.481 kb on - strand, within SM_b20659 at 1460.495 kb on + strand, within SM_b20659 at 1460.496 kb on - strand, within SM_b20659 at 1460.728 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 1,458,105 + -0.7 1,458,173 + +0.4 1,458,174 - -1.0 1,458,247 + -2.4 1,458,466 + SM_b20657 0.36 +0.3 1,458,477 + SM_b20657 0.38 -0.4 1,458,477 + SM_b20657 0.38 +0.5 1,458,478 - SM_b20657 0.38 +0.1 1,458,927 + -2.7 1,458,927 + +1.0 1,458,928 - -0.4 1,458,928 - -0.5 1,458,928 - +0.5 1,458,928 - -0.1 1,458,930 + -1.7 1,458,931 - +0.1 1,458,931 - +1.5 1,458,948 + +1.1 1,458,949 - +0.4 1,458,949 - +0.2 1,459,089 + SM_b20658 0.22 -0.2 1,459,245 + SM_b20658 0.39 -3.0 1,459,246 - SM_b20658 0.39 -0.5 1,459,275 - SM_b20658 0.42 -0.1 1,459,291 - SM_b20658 0.44 -0.3 1,459,320 + SM_b20658 0.47 -0.4 1,459,383 + SM_b20658 0.54 -0.0 1,459,446 + SM_b20658 0.61 +0.3 1,459,447 - SM_b20658 0.62 +0.3 1,459,447 - SM_b20658 0.62 +0.3 1,459,447 - SM_b20658 0.62 +0.7 1,459,490 + SM_b20658 0.66 +0.5 1,459,527 + SM_b20658 0.70 -0.5 1,459,528 - SM_b20658 0.71 -0.4 1,459,548 + SM_b20658 0.73 -3.2 1,459,548 + SM_b20658 0.73 -0.1 1,459,548 + SM_b20658 0.73 -1.8 1,459,592 - SM_b20658 0.78 +0.0 1,459,593 + SM_b20658 0.78 -1.0 1,459,593 + SM_b20658 0.78 -0.8 1,459,594 - SM_b20658 0.78 -1.9 1,459,594 - SM_b20658 0.78 -0.1 1,459,594 - SM_b20658 0.78 +2.7 1,459,603 - SM_b20658 0.79 -4.3 1,459,650 + SM_b20658 0.84 -2.6 1,459,667 + SM_b20658 0.86 -0.7 1,459,668 - SM_b20658 0.86 -0.7 1,459,668 - SM_b20658 0.86 +1.3 1,459,695 + SM_b20658 0.89 +0.9 1,459,696 - SM_b20658 0.89 -2.7 1,459,696 - SM_b20658 0.89 -2.2 1,459,696 - SM_b20658 0.89 -0.0 1,459,731 + +0.3 1,459,732 - -0.5 1,459,732 - -0.6 1,460,004 - SM_b20659 0.21 -0.0 1,460,004 - SM_b20659 0.21 -0.3 1,460,004 - SM_b20659 0.21 -0.1 1,460,090 + SM_b20659 0.30 +0.1 1,460,475 - SM_b20659 0.72 -2.7 1,460,480 + SM_b20659 0.72 -0.1 1,460,481 - SM_b20659 0.72 +1.7 1,460,495 + SM_b20659 0.74 +0.6 1,460,496 - SM_b20659 0.74 +0.0 1,460,728 + -0.7
Or see this region's nucleotide sequence