Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20470 and SM_b20471 are separated by 30 nucleotides SM_b20471 and SM_b20472 are separated by 13 nucleotides SM_b20472 and SM_b20473 are separated by 314 nucleotides
SM_b20470: SM_b20470 - hypothetical protein, at 483,955 to 484,386
_b20470
SM_b20471: SM_b20471 - hypothetical protein, at 484,417 to 484,566
_b20471
SM_b20472: SM_b20472 - nodulation protein, at 484,580 to 486,412
_b20472
SM_b20473: SM_b20473 - hypothetical protein, at 486,727 to 487,224
_b20473
Position (kb) 484
485
486
487 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 483.626 kb on + strand at 483.709 kb on + strand at 483.823 kb on - strand at 483.823 kb on - strand at 483.852 kb on + strand at 484.023 kb on + strand, within SM_b20470 at 484.024 kb on - strand, within SM_b20470 at 484.047 kb on + strand, within SM_b20470 at 484.083 kb on - strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.193 kb on + strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.194 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.198 kb on - strand, within SM_b20470 at 484.237 kb on + strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.238 kb on - strand, within SM_b20470 at 484.257 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.327 kb on + strand, within SM_b20470 at 484.328 kb on - strand, within SM_b20470 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand at 484.444 kb on + strand, within SM_b20471 at 484.444 kb on + strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.445 kb on - strand, within SM_b20471 at 484.447 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.553 kb on - strand at 484.585 kb on + strand at 484.585 kb on + strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.586 kb on - strand at 484.590 kb on + strand at 484.595 kb on - strand at 484.608 kb on - strand at 484.721 kb on + strand at 484.722 kb on - strand at 484.722 kb on - strand at 484.776 kb on - strand, within SM_b20472 at 484.776 kb on - strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.817 kb on + strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.818 kb on - strand, within SM_b20472 at 484.914 kb on - strand, within SM_b20472 at 484.917 kb on + strand, within SM_b20472 at 484.918 kb on - strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.100 kb on + strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.101 kb on - strand, within SM_b20472 at 485.104 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.156 kb on + strand, within SM_b20472 at 485.157 kb on - strand, within SM_b20472 at 485.159 kb on + strand, within SM_b20472 at 485.160 kb on - strand, within SM_b20472 at 485.189 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.191 kb on + strand, within SM_b20472 at 485.192 kb on - strand, within SM_b20472 at 485.214 kb on - strand, within SM_b20472 at 485.684 kb on + strand, within SM_b20472 at 485.685 kb on - strand, within SM_b20472 at 485.748 kb on - strand, within SM_b20472 at 486.012 kb on - strand, within SM_b20472 at 486.012 kb on - strand, within SM_b20472 at 486.013 kb on + strand, within SM_b20472 at 486.013 kb on + strand, within SM_b20472 at 486.013 kb on + strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.014 kb on - strand, within SM_b20472 at 486.033 kb on + strand, within SM_b20472 at 486.033 kb on + strand, within SM_b20472 at 486.034 kb on - strand, within SM_b20472 at 486.087 kb on + strand, within SM_b20472 at 486.087 kb on + strand, within SM_b20472 at 486.088 kb on - strand, within SM_b20472 at 486.141 kb on - strand, within SM_b20472 at 486.199 kb on - strand, within SM_b20472 at 486.199 kb on - strand, within SM_b20472 at 486.199 kb on - strand, within SM_b20472 at 486.231 kb on + strand at 486.273 kb on + strand at 486.273 kb on + strand at 486.274 kb on - strand at 486.386 kb on + strand at 486.386 kb on + strand at 486.427 kb on - strand at 486.442 kb on - strand at 486.442 kb on - strand at 486.705 kb on - strand at 486.865 kb on + strand, within SM_b20473 at 486.925 kb on + strand, within SM_b20473 at 486.926 kb on - strand, within SM_b20473 at 487.032 kb on - strand, within SM_b20473 at 487.032 kb on - strand, within SM_b20473 at 487.032 kb on - strand, within SM_b20473 at 487.032 kb on - strand, within SM_b20473 at 487.104 kb on + strand, within SM_b20473 at 487.104 kb on + strand, within SM_b20473 at 487.105 kb on - strand, within SM_b20473 at 487.181 kb on + strand at 487.181 kb on + strand at 487.261 kb on + strand at 487.262 kb on - strand at 487.262 kb on - strand at 487.262 kb on - strand at 487.262 kb on - strand at 487.268 kb on - strand at 487.270 kb on + strand at 487.270 kb on + strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.271 kb on - strand at 487.350 kb on + strand at 487.351 kb on - strand at 487.361 kb on + strand at 487.362 kb on - strand at 487.376 kb on - strand at 487.387 kb on + strand at 487.388 kb on - strand at 487.388 kb on - strand at 487.388 kb on - strand at 487.388 kb on - strand at 487.388 kb on - strand at 487.389 kb on + strand at 487.389 kb on + strand at 487.390 kb on - strand at 487.390 kb on - strand at 487.391 kb on + strand at 487.392 kb on - strand at 487.392 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 483,626 + +0.2 483,709 + -1.4 483,823 - +0.5 483,823 - +0.4 483,852 + -0.3 484,023 + SM_b20470 0.16 +0.7 484,024 - SM_b20470 0.16 +0.5 484,047 + SM_b20470 0.21 -0.7 484,083 - SM_b20470 0.30 +0.5 484,193 + SM_b20470 0.55 -0.6 484,193 + SM_b20470 0.55 +0.6 484,194 - SM_b20470 0.55 +1.1 484,194 - SM_b20470 0.55 -0.0 484,194 - SM_b20470 0.55 -0.2 484,198 - SM_b20470 0.56 -3.9 484,198 - SM_b20470 0.56 -0.2 484,198 - SM_b20470 0.56 +0.5 484,198 - SM_b20470 0.56 -3.0 484,198 - SM_b20470 0.56 +0.9 484,237 + SM_b20470 0.65 -0.1 484,238 - SM_b20470 0.66 -2.2 484,238 - SM_b20470 0.66 -0.4 484,257 + SM_b20470 0.70 +1.4 484,327 + SM_b20470 0.86 +1.7 484,327 + SM_b20470 0.86 +0.1 484,327 + SM_b20470 0.86 +0.1 484,328 - SM_b20470 0.86 +0.7 484,444 + SM_b20471 0.18 -0.0 484,444 + SM_b20471 0.18 -1.5 484,444 + +4.5 484,444 + SM_b20471 0.18 -1.2 484,444 + SM_b20471 0.18 -0.0 484,445 - SM_b20471 0.19 +0.3 484,445 - SM_b20471 0.19 +0.3 484,445 - SM_b20471 0.19 +0.5 484,445 - SM_b20471 0.19 -0.8 484,445 - SM_b20471 0.19 -1.9 484,447 - +4.5 484,553 - +0.2 484,553 - +0.8 484,553 - -2.1 484,585 + -2.1 484,585 + +0.5 484,586 - -1.6 484,586 - +0.2 484,586 - -1.5 484,586 - +1.4 484,586 - -0.6 484,590 + +0.4 484,595 - -0.2 484,608 - +1.1 484,721 + -4.1 484,722 - -1.5 484,722 - +2.5 484,776 - SM_b20472 0.11 +1.3 484,776 - SM_b20472 0.11 +1.3 484,817 + SM_b20472 0.13 -0.1 484,817 + SM_b20472 0.13 +0.6 484,818 - SM_b20472 0.13 +0.0 484,818 - SM_b20472 0.13 +2.1 484,914 - SM_b20472 0.18 +0.3 484,917 + SM_b20472 0.18 +0.2 484,918 - SM_b20472 0.18 +0.7 485,100 + SM_b20472 0.28 +1.0 485,100 + SM_b20472 0.28 +0.5 485,101 - SM_b20472 0.28 +1.5 485,101 - SM_b20472 0.28 -3.1 485,104 + SM_b20472 0.29 +1.4 485,156 + SM_b20472 0.31 +4.3 485,156 + SM_b20472 0.31 +1.3 485,157 - SM_b20472 0.31 +0.5 485,159 + SM_b20472 0.32 -2.7 485,160 - SM_b20472 0.32 -1.8 485,189 + SM_b20472 0.33 +0.9 485,191 + SM_b20472 0.33 +0.5 485,191 + SM_b20472 0.33 -2.6 485,192 - SM_b20472 0.33 -2.9 485,214 - SM_b20472 0.35 +1.2 485,684 + SM_b20472 0.60 +2.5 485,685 - SM_b20472 0.60 -2.0 485,748 - SM_b20472 0.64 +0.5 486,012 - SM_b20472 0.78 +1.7 486,012 - SM_b20472 0.78 +0.5 486,013 + SM_b20472 0.78 -0.7 486,013 + SM_b20472 0.78 +0.6 486,013 + SM_b20472 0.78 -0.3 486,014 - SM_b20472 0.78 -1.1 486,014 - SM_b20472 0.78 +0.5 486,014 - SM_b20472 0.78 -0.1 486,014 - SM_b20472 0.78 +0.6 486,014 - SM_b20472 0.78 -1.9 486,014 - SM_b20472 0.78 +0.2 486,033 + SM_b20472 0.79 +0.4 486,033 + SM_b20472 0.79 -0.7 486,034 - SM_b20472 0.79 -0.6 486,087 + SM_b20472 0.82 -2.7 486,087 + SM_b20472 0.82 -2.3 486,088 - SM_b20472 0.82 +1.3 486,141 - SM_b20472 0.85 -0.2 486,199 - SM_b20472 0.88 -0.4 486,199 - SM_b20472 0.88 +1.3 486,199 - SM_b20472 0.88 +4.0 486,231 + +4.0 486,273 + -0.3 486,273 + -0.1 486,274 - +0.8 486,386 + +0.3 486,386 + +1.0 486,427 - -0.3 486,442 - +0.6 486,442 - +0.2 486,705 - -1.2 486,865 + SM_b20473 0.28 -0.7 486,925 + SM_b20473 0.40 -0.5 486,926 - SM_b20473 0.40 -0.6 487,032 - SM_b20473 0.61 +1.7 487,032 - SM_b20473 0.61 -2.4 487,032 - SM_b20473 0.61 +0.9 487,032 - SM_b20473 0.61 +0.4 487,104 + SM_b20473 0.76 +0.5 487,104 + SM_b20473 0.76 -0.4 487,105 - SM_b20473 0.76 -1.2 487,181 + -0.0 487,181 + -1.5 487,261 + -0.2 487,262 - -0.2 487,262 - -0.5 487,262 - -1.1 487,262 - +0.8 487,268 - -0.7 487,270 + +0.4 487,270 + -2.0 487,271 - -0.4 487,271 - -0.8 487,271 - -0.1 487,350 + +0.1 487,351 - -1.8 487,361 + -0.1 487,362 - +0.1 487,376 - +0.5 487,387 + +0.1 487,388 - +0.1 487,388 - +0.0 487,388 - -0.6 487,388 - +1.1 487,388 - +0.2 487,389 + +1.4 487,389 + +0.3 487,390 - +3.0 487,390 - +1.1 487,391 + -1.8 487,392 - +3.9 487,392 - +1.1
Or see this region's nucleotide sequence